RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 TCF25Q9BQ70 676 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 CHCHD6Q9BRQ6 235 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 GPR63Q9BZJ6 419 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 BRD8Q9H0E9 1235 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 SLC25A32Q9H2D1 315 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 IKZF4Q9H2S9 585 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 EPS8L2Q9H6S3 715 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 FBXO34Q9NWN3 711 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 ARHGAP26Q9UNA1 814 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 C19orf53Q9UNZ5 99 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 HPSEQ9Y251 543 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 RRP7AQ9Y3A4 280 aaKnown RBP4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 NR2E1Q9Y466 385 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 CDY1Q9Y6F8 540 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 PNPLA7Q6ZV29 1317 aa4.39□□□□□ -1.71
TRAPPC13-208ENST00000505553 UBE2QL1A1L167 161 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 POLRMTO00411 1230 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 PCDH17O14917 1159 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 RGS10O43665 173 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ORC4O43929 436 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TSPAN3O60637 253 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TMCC2O75069 709 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF623O75123 536 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 GFPT2O94808 682 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZNF202O95125 648 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 RASAL1O95294 804 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 JUPP14923 745 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CCR5P51681 352 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CASP6P55212 293 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 DCAF7P61962 342 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 GPS1Q13098 491 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 KCNAB1Q14722 419 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ACAP1Q15027 740 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 RPS6KA2Q15349 733 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TRIM60Q495X7 471 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 HS1BP3Q53T59 392 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 SLC45A4Q5BKX6 768 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM133BQ5BKY9 247 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 MIIPQ5JXC2 388 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 GPATCH4Q5T3I0 446 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ICE2Q659A1 982 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 EFCAB12Q6NXP0 572 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 DOK3Q7L591 496 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 RALYLQ86SE5 291 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ADGRE4PQ86SQ3 457 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 FAM83AQ86UY5 434 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 OR8H2Q8N162 312 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 PDPRQ8NCN5 879 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ADAMTS15Q8TE58 950 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ADAMTS18Q8TE60 1221 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ABHD5Q8WTS1 349 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ST8SIA4Q92187 359 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TFAP2CQ92754 450 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 SLC46A1Q96NT5 459 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 BARD1Q99728 777 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 SLC46A2Q9BY10 475 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 PAIP1Q9H074 479 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ELAC1Q9H777 363 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 MSL2Q9HCI7 577 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 G6PC2Q9NQR9 355 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 NSMCE4AQ9NXX6 385 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 NDUFAF4Q9P032 175 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 DNMT3BQ9UBC3 853 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TBX20Q9UMR3 447 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 NFU1Q9UMS0 254 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TBC1D30Q9Y2I9 924 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 DERAQ9Y315 318 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 PNMA6EA0A0J9YXQ4 647 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 FSD2A1L4K1 749 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 PRR5-ARHGAP8B1AHC4 643 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 PATE3B3GLJ2 98 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 E7EVH7 732 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 E9PLN8 166 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TMEM63AO94886 807 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 RTN3O95197 1032 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CNPP09543 421 aaKnown RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 MYCLP12524 364 aaPredicted RBP4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 MGAT1P26572 445 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CDK7P50613 346 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 SEC24CP53992 1094 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 INHBCP55103 352 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 LOXL3P58215 753 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CCNG2Q16589 344 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 TBR1Q16650 682 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CCDC96Q2M329 555 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 MANEALQ5VSG8 457 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 NAA35Q5VZE5 725 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ANKS6Q68DC2 871 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ACAD10Q6JQN1 1059 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 MFSD5Q6N075 450 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 RRAGAQ7L523 313 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CPT1CQ8TCG5 803 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 CSGALNACT1Q8TDX6 532 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZUFSPQ96AP4 578 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 ZG16BQ96DA0 208 aa4.38□□□□□ -1.71
TRAPPC13-208ENST00000505553 VKORC1Q9BQB6 163 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms