RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 METTL23Q86XA0 190 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 NT5DC4Q86YG4 428 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 SLC41A1Q8IVJ1 513 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 TMEM130Q8N3G9 435 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 CCDC33Q8N5R6 958 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 ALLCQ8N6M5 410 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 FRMD1Q8N878 549 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 PNPLA1Q8N8W4 532 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 TRIML1Q8N9V2 468 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 TMEM161BQ8NDZ6 487 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 C1orf216Q8TAB5 229 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 SH3RF2Q8TEC5 729 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 SNRNP27Q8WVK2 155 aaKnown RBP6.46□□□□□ -1.38
GYPB-204ENST00000504951 ZBTB45Q96K62 511 aaPredicted RBP6.46□□□□□ -1.38
GYPB-204ENST00000504951 SPATA17Q96L03 361 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 NRSN2Q9GZP1 204 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 PCED1AQ9H1Q7 454 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 BHMT2Q9H2M3 363 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 ASB7Q9H672 318 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 CLMPQ9H6B4 373 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 BRMS1Q9HCU9 246 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 OSGEPQ9NPF4 335 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 KMT5AQ9NQR1 393 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 EHD2Q9NZN4 543 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 KCND2Q9NZV8 630 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 TBC1D14Q9P2M4 693 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 PCDHGA1Q9Y5H4 931 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 WNT6Q9Y6F9 365 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 CEP192Q8TEP8 1941 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 A0A1W2PQF6 199 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 LACTBL1A8MY62 500 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 TULP1O00294 542 aaPredicted RBP6.45□□□□□ -1.38
GYPB-204ENST00000504951 CYB561D2O14569 222 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 OGTO15294 1046 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 CAPN5O15484 640 aaPredicted RBP6.45□□□□□ -1.38
GYPB-204ENST00000504951 ARHGAP6O43182 974 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 PCDHGA12O60330 932 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 KLF8O95600 359 aaPredicted RBP6.45□□□□□ -1.38
GYPB-204ENST00000504951 IGLV3-19P01714 112 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 PRB1P04280 392 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 NTRK1P04629 796 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 CYP17A1P05093 508 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 CXCL8P10145 99 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 MAPTP10636 758 aaKnown RBP6.45□□□□□ -1.38
GYPB-204ENST00000504951 HLA-EP13747 358 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 U2AF2P26368 475 aaKnown RBP eCLIP6.45□□□□□ -1.38
GYPB-204ENST00000504951 NMT1P30419 496 aaKnown RBP6.45□□□□□ -1.38
GYPB-204ENST00000504951 NTSR1P30989 418 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 ABCD1P33897 745 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 MAGEA11P43364 429 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 SMTNP53814 917 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 ZXDBP98169 803 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 RHDQ02161 417 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 PPP2R3AQ06190 1150 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 SRSF1Q07955 248 aaKnown RBP eCLIP6.45□□□□□ -1.38
GYPB-204ENST00000504951 GRIK2Q13002 908 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 STRN3Q13033 797 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 DHCR24Q15392 516 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 ZNF174Q15697 407 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 PLEKHG6Q3KR16 790 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 RINT1Q6NUQ1 792 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 PCSK4Q6UW60 755 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 LRRC69Q6ZNQ3 347 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 GPR155Q7Z3F1 870 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 RETREG3Q86VR2 466 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 DDX42Q86XP3 938 aaKnown RBP eCLIP6.45□□□□□ -1.38
GYPB-204ENST00000504951 ETFBKMTQ8IXQ9 262 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 TMEM86AQ8N2M4 240 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 C4orf32Q8N8J7 132 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 ZSCAN1Q8NBB4 408 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 GIPC2Q8TF65 315 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 HMGB4Q8WW32 186 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 SLC22A12Q96S37 553 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 CYP2S1Q96SQ9 504 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 PKMYT1Q99640 499 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 GABRG3Q99928 467 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 TTLL2Q9BWV7 592 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 BCCIPQ9P287 314 aaKnown RBP eCLIP6.45□□□□□ -1.38
GYPB-204ENST00000504951 OBSL1O75147 1896 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 ANK1P16157 1881 aa6.45□□□□□ -1.38
GYPB-204ENST00000504951 ADAMTS9Q9P2N4 1935 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 A0A0B4J269 797 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 TCRBV21S2A2A0A5A6 115 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 E2F8A0AVK6 867 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 PP2D1A8MPX8 630 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 LEFTY2O00292 366 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 NPC1O15118 1278 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 RRP8O43159 456 aaKnown RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 HOXC11O43248 304 aaPredicted RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 DFNA5O60443 496 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 HIP1RO75146 1068 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 ADH1CP00326 375 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 CKMP06732 381 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 ATXN1LP0C7T5 689 aaKnown RBP6.44□□□□□ -1.38
GYPB-204ENST00000504951 PLS3P13797 630 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 TAF6P49848 677 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 NEK4P51957 841 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 ANAPC15P60006 121 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 TSPY1Q01534 308 aa6.44□□□□□ -1.38
GYPB-204ENST00000504951 KCNB1Q14721 858 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms