RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ALG3Q92685 438 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 IGSF21Q96ID5 467 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 MS4A14Q96JA4 679 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 ZNF558Q96NG5 402 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 PSMB7Q99436 277 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 GAS2L1Q99501 681 aaPredicted RBP10.64□□□□□ -0.71
DDX41-203ENST00000504781 TTPALQ9BTX7 342 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 TRIM62Q9BVG3 475 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 COL25A1Q9BXS0 654 aaPredicted RBP10.64□□□□□ -0.71
DDX41-203ENST00000504781 NKX2-4Q9H2Z4 354 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 PRDM12Q9H4Q4 367 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 METTL5Q9NRN9 209 aaKnown RBP10.64□□□□□ -0.71
DDX41-203ENST00000504781 CHST7Q9NS84 486 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 HOMER3Q9NSC5 361 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 COMMD8Q9NX08 183 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 MARCH5Q9NX47 278 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 SPG21Q9NZD8 308 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 TJP2Q9UDY2 1190 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 EFR3BQ9Y2G0 817 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 INSL6Q9Y581 213 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 PCDHB5Q9Y5E4 795 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 BACE2Q9Y5Z0 518 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 SLC4A7Q9Y6M7 1214 aa10.64□□□□□ -0.71
DDX41-203ENST00000504781 F8W810 466 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 HSF2BPO75031 334 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 ENDOD1O94919 500 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 PYGMP11217 842 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 IGFBP4P22692 258 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 MCM3P25205 808 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 SDC4P31431 198 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 NOS2P35228 1153 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 MATKP42679 507 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 TKTL1P51854 596 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 RNASE9P60153 205 aaKnown RBP10.63□□□□□ -0.71
DDX41-203ENST00000504781 ZNF252P-AS1Q0IIN9 211 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 BTG3Q14201 252 aaPredicted RBP10.63□□□□□ -0.71
DDX41-203ENST00000504781 LONRF2Q1L5Z9 754 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 ERCC6LQ2NKX8 1250 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 CCDC14Q49A88 953 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 SEL1L2Q5TEA6 688 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 STRADAQ7RTN6 431 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 DDX53Q86TM3 631 aaKnown RBP10.63□□□□□ -0.71
DDX41-203ENST00000504781 RNF168Q8IYW5 571 aaPredicted RBP10.63□□□□□ -0.71
DDX41-203ENST00000504781 SIX6OS1Q8N1H7 587 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 ZMIZ2Q8NF64 920 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 CMASQ8NFW8 434 aaPredicted RBP10.63□□□□□ -0.71
DDX41-203ENST00000504781 SPPL2BQ8TCT7 592 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 KRT35Q92764 455 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 NT5C3BQ969T7 300 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 MYLPFQ96A32 169 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 C8orf48Q96LL4 319 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 KCNK16Q96T55 309 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 SLC28A3Q9HAS3 691 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 RC3H2Q9HBD1 1191 aaKnown RBP10.63□□□□□ -0.71
DDX41-203ENST00000504781 DMAP1Q9NPF5 467 aaPredicted RBP10.63□□□□□ -0.71
DDX41-203ENST00000504781 TMLHEQ9NVH6 421 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDX41-203ENST00000504781 HSFX1Q9UBD0 423 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 MTUS1Q9ULD2 1270 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 MAFFQ9ULX9 164 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 SSX2IPQ9Y2D8 614 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 USP3Q9Y6I4 520 aa10.63□□□□□ -0.71
DDX41-203ENST00000504781 A0A0C4DFX4 3053 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 TARSL2A2RTX5 802 aaKnown RBP10.62□□□□□ -0.71
DDX41-203ENST00000504781 NT5C1B-RDH14C9J2C7 533 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 KRIT1O00522 736 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 TRIM66O15016 1216 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 GJB6O95452 261 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 ZBED1O96006 694 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 F9P00740 461 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 FGGP02679 453 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 MYOGP15173 224 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 GRIK1P39086 918 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 SSR1P43307 286 aaKnown RBP10.62□□□□□ -0.71
DDX41-203ENST00000504781 TAS2R40P59535 323 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 DEFB103AP81534 67 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 HTRA4P83105 476 aaPredicted RBP10.62□□□□□ -0.71
DDX41-203ENST00000504781 KRT17Q04695 432 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 CCDC85BQ15834 202 aaPredicted RBP10.62□□□□□ -0.71
DDX41-203ENST00000504781 SLC25A52Q3SY17 297 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 SLC39A12Q504Y0 691 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 ODF2Q5BJF6 829 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 SPOUT1Q5T280 376 aaKnown RBP10.62□□□□□ -0.71
DDX41-203ENST00000504781 DCAF12L1Q5VU92 463 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 MAATS1Q7Z4T9 603 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 VSIG1Q86XK7 387 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 SLC13A5Q86YT5 568 aaPredicted RBP10.62□□□□□ -0.71
DDX41-203ENST00000504781 SLC39A11Q8N1S5 342 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 ARFGAP1Q8N6T3 406 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 CCDC26Q8TAB7 109 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 TEKT4Q8WW24 435 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 PIK3R5Q8WYR1 880 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 RUBCNQ92622 972 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 RBM41Q96IZ5 413 aaKnown RBP10.62□□□□□ -0.71
DDX41-203ENST00000504781 RUNDC3BQ96NL0 473 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 TMEM209Q96SK2 561 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 FBXO44Q9H4M3 255 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 POPDC2Q9HBU9 364 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 KRT82Q9NSB4 513 aa10.62□□□□□ -0.71
DDX41-203ENST00000504781 FEZ2Q9UHY8 353 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms