RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 METAP1P53582 386 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 POLGP54098 1239 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 EPHB4P54760 987 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 FAXCQ5TGI0 409 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 Q6ZVL8 140 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 KRT73Q86Y46 540 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 ADSSL1Q8N142 457 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 PDLIM5Q96HC4 596 aaKnown RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 FEM1CQ96JP0 617 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 CITED2Q99967 270 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 INTS2Q9H0H0 1204 aaKnown RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 WNT5BQ9H1J7 359 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 SYNCQ9H7C4 482 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 TDP1Q9NUW8 608 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 SOHLH2Q9NX45 425 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 SIRT5Q9NXA8 310 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 P4HTMQ9NXG6 502 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 CPSF2Q9P2I0 782 aaKnown RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 CACNG4Q9UBN1 327 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 STARD13Q9Y3M8 1113 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 CDY2AQ9Y6F7 541 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 A8MXE2 369 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 C22orf46C9J442 243 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 PALMO75781 387 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 PFKMP08237 780 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 UBL4AP11441 157 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 TACR1P25103 407 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 ARCN1P48444 511 aaKnown RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 KCNJ10P78508 379 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.56□□□□□ -1.526e-6■■□□□ 12.4
NIPBL-204ENST00000504430 SGO2Q562F6 1265 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 UBXN11Q5T124 520 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 CYP4F22Q6NT55 531 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 C11orf88Q6PI97 169 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 CNTN4Q8IWV2 1026 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 SYCP3Q8IZU3 236 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 KCNE4Q8WWG9 221 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 MR1Q95460 341 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 MSLNLQ96KJ4 702 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 NELFAQ9H3P2 528 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 TLR8Q9NR97 1041 aaKnown RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 RGL1Q9NZL6 768 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 AIPL1Q9NZN9 384 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 UBA2Q9UBT2 640 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 SCOCQ9UIL1 159 aa5.56□□□□□ -1.52
NIPBL-204ENST00000504430 PIN4Q9Y237 131 aaKnown RBP5.56□□□□□ -1.52
NIPBL-204ENST00000504430 UBA6A0AVT1 1052 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 C1QTNF9BB2RNN3 333 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 STMND1H3BQB6 276 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PEX11AO75192 247 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 SCGB1D1O95968 90 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TPM3P06753 285 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CA8P35219 290 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ARL3P36405 182 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CARSP49589 748 aaKnown RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PDK1Q15118 436 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ADALQ6DHV7 355 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CAND1Q86VP6 1230 aaKnown RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PHYKPLQ8IUZ5 450 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 MFSD2AQ8NA29 543 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 HIPK4Q8NE63 616 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CASP10Q92851 521 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TNFRSF25Q93038 417 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 C3orf49Q96BT1 292 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 PRICKLE1Q96MT3 831 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TRAPPC9Q96Q05 1148 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 METTL22Q9BUU2 404 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ASPNQ9BXN1 380 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CHST8Q9H2A9 424 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 HSPBP1Q9NZL4 362 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 SH3BP4Q9P0V3 963 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 KLHL20Q9Y2M5 609 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TRPV2Q9Y5S1 764 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ST20-MTHFSA0A0A6YYL1 179 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ISM1B1AKI9 464 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 LEFTY1O75610 366 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 RASSF9O75901 435 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 F9P00740 461 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 FUCA1P04066 466 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 TK1P04183 234 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 GJB1P08034 283 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 EN2P19622 333 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 FPR1P21462 350 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ADRA1BP35368 520 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 KCNJ1P48048 391 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 ACY1Q03154 408 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 GEN1Q17RS7 908 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 C1orf185Q5T7R7 199 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 MCTP2Q6DN12 878 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 OLFML1Q6UWY5 402 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 LURAP1LQ8IV03 231 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 DMRTC2Q8IXT2 367 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-204ENST00000504430 AGGF1Q8N302 714 aaeCLIP5.55□□□□□ -1.521e-6■□□□□ 8.4
NIPBL-204ENST00000504430 C10orf53Q8N6V4 93 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 C3orf20Q8ND61 904 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 C7orf57Q8NEG2 295 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 OR14C36Q8NHC7 312 aa5.55□□□□□ -1.52
NIPBL-204ENST00000504430 CTCFLQ8NI51 663 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms