RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	ZNF362	Q5T0B9	420 aa	Predicted RBP	18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	RCOR2	Q8IZ40	523 aa		18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	DCAKD	Q8WVC6	231 aa		18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	FAM111A	Q96PZ2	611 aa		18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	KLF6	Q99612	283 aa	Predicted RBP	18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	RRN3	Q9NYV6	651 aa		18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PCDHGB4	Q9UN71	923 aa		18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	FAM32A	Q9Y421	112 aa	Known RBP	18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PCDHGB5	Q9Y5G0	923 aa		18.56	■□□□□ 0.56
POLR2J3-209	ENST00000504157	IPO5	O00410	1097 aa	Known RBP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CHMP2A	O43633	222 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SERPINB6	P35237	376 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	GTF2B	Q00403	316 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	EFTUD2	Q15029	972 aa	Known RBP eCLIP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	TGFBI	Q15582	683 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	OASL	Q15646	514 aa	Known RBP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SLC51A	Q86UW1	340 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	AMIGO3	Q86WK7	504 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	RTKN2	Q8IZC4	609 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ARL10	Q8N8L6	244 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	TTC13	Q8NBP0	860 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	NKD2	Q969F2	451 aa	Predicted RBP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	TTC17	Q96AE7	1141 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	APOPT1	Q96IL0	206 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PRPF18	Q99633	342 aa	Known RBP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	GAS7	O60861	476 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CRTAM	O95727	393 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	HLA-DOA	P06340	250 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ITGAV	P06756	1048 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ZSCAN5DP	P0CG00	497 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SRGAP2C	P0DJJ0	459 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SRGAP2B	P0DMP2	458 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PHKA2	P46019	1235 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	NOP14	P78316	857 aa	Known RBP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SLC18A2	Q05940	514 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	LIN9	Q5TKA1	542 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CIAPIN1	Q6FI81	312 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	KBTBD6	Q86V97	674 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	FBXL13	Q8NEE6	735 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PYROXD1	Q8WU10	500 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	VCPIP1	Q96JH7	1222 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	EIF2A	Q9BY44	585 aa	Known RBP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SMYD3	Q9H7B4	428 aa		18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	MRPL47	Q9HD33	250 aa	Known RBP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157	C6orf203	Q9P0P8	240 aa	Predicted RBP	18.55	■□□□□ 0.56
POLR2J3-209	ENST00000504157		E7ESA3	106 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ZC3H11A	O75152	810 aa	Known RBP eCLIP	18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	UFL1	O94874	794 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	MT-ND3	P03897	115 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PDGFRB	P09619	1106 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	EEF2	P13639	858 aa	Known RBP	18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	NSF	P46459	744 aa	Known RBP	18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	HDAC4	P56524	1084 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SLC25A3	Q00325	362 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ENPEP	Q07075	957 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PDAP1	Q13442	181 aa	Known RBP	18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	TFDP1	Q14186	410 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CNGA3	Q16281	694 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CLPP	Q16740	277 aa	Predicted RBP	18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	RABGAP1L	Q5R372	815 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CCDC24	Q8N4L8	307 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	TMC2	Q8TDI7	906 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	DHX38	Q92620	1227 aa	Known RBP	18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CAMKK2	Q96RR4	588 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	LXN	Q9BS40	222 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	RAB20	Q9NX57	234 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ZHX2	Q9Y6X8	837 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SF3B1	O75533	1304 aa	Known RBP eCLIP	18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	MEI4	A8MW99	385 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157		I3L4J1	428 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	FAM155B	O75949	473 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	C6orf222	P0C671	652 aa	Predicted RBP	18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	FAM58BP	P0C7Q3	252 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	POLR2M	P0CAP2	368 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	STT3A	P46977	705 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ENTPD1	P49961	510 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ZNF423	Q2M1K9	1284 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ELMSAN1	Q6PJG2	1045 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PADI6	Q6TGC4	694 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SH2D5	Q6ZV89	423 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ZSWIM2	Q8NEG5	633 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ACTRT2	Q8TDY3	377 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	GMCL1	Q96IK5	515 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SLITRK1	Q96PX8	696 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	TMOD2	Q9NZR1	351 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PCDHB2	Q9Y5E7	798 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	SNCAIP	Q9Y6H5	919 aa		18.54	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CCDC162P	A2VCL2	907 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	FUOM	A2VDF0	154 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ADAM23	O75077	832 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	RPS6KA4	O75676	772 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	RBP3	P10745	1247 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	GYS1	P13807	737 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	CD58	P19256	250 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	PAX3	P23760	479 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	HOXA13	P31271	388 aa	Predicted RBP	18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	BAG6	P46379	1132 aa		18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	ALDH18A1	P54886	795 aa	Known RBP	18.53	■□□□□ 0.56
POLR2J3-209	ENST00000504157	C16orf72	Q14CZ0	275 aa		18.53	■□□□□ 0.56

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