RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 PRKCGP05129 697 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 NBPF7P0C2Y1 421 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-208ENST00000504047 CTGFP29279 349 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 UQCRC1P31930 480 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 GKP32189 559 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 GNALP38405 381 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 GATMP50440 423 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 C21orf58P58505 322 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 TIRAPP58753 221 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 E2F1Q01094 437 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 SLC10A2Q12908 348 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-208ENST00000504047 NPY5RQ15761 445 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 CCDC142Q17RM4 750 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 TMEM63BQ5T3F8 832 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 KIAA1614Q5VZ46 1190 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 FCRL6Q6DN72 434 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 TRIM72Q6ZMU5 477 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 KCTD20Q7Z5Y7 419 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 CCDC33Q8N5R6 958 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 CCDC150Q8NCX0 1101 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 ZC3H10Q96K80 434 aaKnown RBP3.69□□□□□ -1.82
ATXN3-208ENST00000504047 PRR25Q96S07 402 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 HEYLQ9NQ87 328 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-208ENST00000504047 SNX15Q9NRS6 342 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 NKX1-2Q9UD57 310 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-208ENST00000504047 KAT6AQ92794 2004 aa3.69□□□□□ -1.82
ATXN3-208ENST00000504047 POM121BA6NF01 834 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 MANSC4A6NHS7 340 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-208ENST00000504047 LINC01548A6NM66 108 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 F8W8V4 182 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 H7C1Q1 480 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 SMIM22K7EJ46 135 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 ZNF213O14771 459 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 KPNA5O15131 536 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 EXOC3O60645 756 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 RBMXL2O75526 392 aaKnown RBP3.68□□□□□ -1.82
ATXN3-208ENST00000504047 MYL1P05976 194 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 HGFP14210 728 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 IDEP14735 1019 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 PIK3CBP42338 1070 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 CYP4F2P78329 520 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 TIAL1Q01085 375 aaKnown RBP eCLIP3.68□□□□□ -1.82
ATXN3-208ENST00000504047 GRM1Q13255 1194 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 ST3GAL2Q16842 350 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 CERKLQ49MI3 558 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-208ENST00000504047 TMEM119Q4V9L6 283 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 C4orf46Q504U0 113 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 CCDC181Q5TID7 509 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 PTCHD4Q6ZW05 846 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 BEND5Q7L4P6 421 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 SFTPA1Q8IWL2 248 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 ATP11CQ8NB49 1132 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 SEMA6DQ8NFY4 1073 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 PJA1Q8NG27 643 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 VPS50Q96JG6 964 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 ZBTB45Q96K62 511 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-208ENST00000504047 HIST1H2AAQ96QV6 131 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 EIF2AQ9BY44 585 aaKnown RBP3.68□□□□□ -1.82
ATXN3-208ENST00000504047 CIPCQ9C0C6 399 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 DNAJB11Q9UBS4 358 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 DKK4Q9UBT3 224 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 SERGEFQ9UGK8 458 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 STEAP1Q9UHE8 339 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 CAPN11Q9UMQ6 739 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 AOX1Q06278 1338 aa3.68□□□□□ -1.82
ATXN3-208ENST00000504047 FER1L4A9Z1Z3 1794 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 ANO9A1A5B4 782 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 CLCA1A8K7I4 914 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 UBE2Q2LH0YL09 131 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 EXOC5O00471 708 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 AREL1O15033 823 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 PMM2O15305 246 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 TMPRSS11DO60235 418 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 FGAP02671 866 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 A1BGP04217 495 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 CREB1P16220 341 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 STT3AP46977 705 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 CASP5P51878 434 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 PROK1P58294 105 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 TUBA4AP68366 448 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 HTRA4P83105 476 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-208ENST00000504047 ZNF543Q08ER8 600 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 PICALMQ13492 652 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 CYP1B1Q16678 543 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 PROSER3Q2NL68 480 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 PRAMEF17Q5VTA0 474 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 CCSAPQ6IQ19 270 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-208ENST00000504047 KIRREL2Q6UWL6 708 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 SERPINA13PQ6UXR4 307 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 DPY19L3Q6ZPD9 716 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 LIX1LQ8IVB5 337 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 TERB1Q8NA31 727 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 CYP2W1Q8TAV3 490 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 NTN5Q8WTR8 489 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-208ENST00000504047 REPS1Q96D71 796 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 LRRC46Q96FV0 321 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 LENG8Q96PV6 779 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-208ENST00000504047 FYTTD1Q96QD9 318 aaKnown RBP3.67□□□□□ -1.82
ATXN3-208ENST00000504047 SNX18Q96RF0 628 aa3.67□□□□□ -1.82
ATXN3-208ENST00000504047 THAP7Q9BT49 309 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms