RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MAP7D1Q3KQU3 841 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 WDR72Q3MJ13 1102 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 FAM26FQ5R3K3 315 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 HECTD3Q5T447 861 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 SCARA3Q6AZY7 606 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 TMEM92Q6UXU6 159 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 HTR3DQ70Z44 454 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 FILIP1Q7Z7B0 1213 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 METTL3Q86U44 580 aaKnown RBP6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 UNC93AQ86WB7 457 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 CRYBG2Q8N1P7 616 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 B3GALNT2Q8NCR0 500 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 CEP76Q8TAP6 659 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 SCFD1Q8WVM8 642 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 SMARCD1Q96GM5 515 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 CHAMP1Q96JM3 812 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 ZFRQ96KR1 1074 aaKnown RBP6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 SPACA7Q96KW9 195 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 MRPL45Q9BRJ2 306 aaKnown RBP6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 TMEM121BQ9BXQ6 578 aaPredicted RBP6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 GZF1Q9H116 711 aaPredicted RBP6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 SNX25Q9H3E2 840 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 FBXO44Q9H4M3 255 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 PCIF1Q9H4Z3 704 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 PNPLA8Q9NP80 782 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 MARK1Q9P0L2 795 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 TFIP11Q9UBB9 837 aaKnown RBP6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 MTMR6Q9Y217 621 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 NFE2L3Q9Y4A8 694 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 NME7Q9Y5B8 376 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 CPQQ9Y646 472 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 LAMA1P25391 3075 aa6.49□□□□□ -1.37
LSM3P4-201ENST00000502948 USP24Q9UPU5 2620 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 ASCC3Q8N3C0 2202 aaKnown RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 C4orf47A7E2U8 309 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 A8MXQ7 604 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 GFRA2O00451 464 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 NPC1O15118 1278 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 SPTLC2O15270 562 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 AP5Z1O43299 807 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 HCRTO43612 131 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 ADAM23O75077 832 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 ZNF217O75362 1048 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 ADH5P11766 374 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 TRIM21P19474 475 aaKnown RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 GBP1P32455 592 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 PSEN1P49768 467 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 NOVA1P51513 510 aaKnown RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 PSMC1P62191 440 aaKnown RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 TNNC1P63316 161 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 SLC14A1Q13336 389 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 TRPC3Q13507 836 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 CCDC142Q17RM4 750 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 KNOP1Q1ED39 458 aaKnown RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 SGSM1Q2NKQ1 1148 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 C2orf27AQ580R0 203 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 MDH1BQ5I0G3 518 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 NAIF1Q69YI7 327 aaPredicted RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 ANO7Q6IWH7 933 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 SLC36A4Q6YBV0 504 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 PAQR9Q6ZVX9 377 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 LPCAT2Q7L5N7 544 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 CYP2U1Q7Z449 544 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 TERB1Q8NA31 727 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 OR6B3Q8NGW1 331 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 PARD3BQ8TEW8 1205 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 ZNF516Q92618 1163 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 ZNF396Q96N95 335 aaPredicted RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 MMS19Q96T76 1030 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 NUSAP1Q9BXS6 441 aaKnown RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 B3GNT5Q9BYG0 378 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 BACH2Q9BYV9 841 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 CD248Q9HCU0 757 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 DMAP1Q9NPF5 467 aaPredicted RBP6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 CYLDQ9NQC7 956 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 SPHK2Q9NRA0 654 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 TMEM30AQ9NV96 361 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 DMAC2Q9NW81 257 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 DEC1Q9P2X7 70 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 PILRBQ9UKJ0 227 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 NEUROG3Q9Y4Z2 214 aa6.48□□□□□ -1.37
LSM3P4-201ENST00000502948 CKAP5Q14008 2032 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 CACNA1EQ15878 2313 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 A0A1W2PQD8 194 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 SGK1O00141 431 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 PDXKO00764 312 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 DCLK1O15075 740 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 COCHO43405 550 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 CACNG3O60359 315 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 GREM1O60565 184 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 C4BPAP04003 597 aaKnown RBP6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 SERPINF2P08697 491 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 PDGFRBP09619 1106 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 DLATP10515 647 aaKnown RBP6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 MBL2P11226 248 aaPredicted RBP6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 P4HA1P13674 534 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 HNRNPLP14866 589 aaKnown RBP eCLIP6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 CACNA2D1P54289 1103 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 ASIC1P78348 528 aa6.47□□□□□ -1.37
LSM3P4-201ENST00000502948 IRX4P78413 519 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms