RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 FBXO44Q9H4M3 255 aa27.6■■■□□ 2.01
CCDC149-203ENST00000502801 SMPD4Q9NXE4 827 aa27.6■■■□□ 2.01
CCDC149-203ENST00000502801 CPQQ9Y646 472 aa27.6■■■□□ 2.01
CCDC149-203ENST00000502801 FANCMQ8IYD8 2048 aa27.6■■■□□ 2.01
CCDC149-203ENST00000502801 VPS13AQ96RL7 3174 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 PMM2O15305 246 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 GNA14O95837 355 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 ZDHHC11BP0C7U3 371 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 SNX30Q5VWJ9 437 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 GPRIN1Q7Z2K8 1008 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 TRIM59Q8IWR1 403 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 DUSP16Q9BY84 665 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 ECT2Q9H8V3 914 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 RBM12Q9NTZ6 932 aaKnown RBP27.59■■■□□ 2.01
CCDC149-203ENST00000502801 MYO15AQ9UKN7 3530 aa27.59■■■□□ 2.01
CCDC149-203ENST00000502801 MBL2P11226 248 aaPredicted RBP27.58■■■□□ 2.01
CCDC149-203ENST00000502801 MARSP56192 900 aaKnown RBP27.58■■■□□ 2.01
CCDC149-203ENST00000502801 LRRC32Q14392 662 aa27.58■■■□□ 2.01
CCDC149-203ENST00000502801 EML3Q32P44 896 aa27.58■■■□□ 2.01
CCDC149-203ENST00000502801 HECTD3Q5T447 861 aa27.58■■■□□ 2.01
CCDC149-203ENST00000502801 CHFRQ96EP1 664 aa27.58■■■□□ 2.01
CCDC149-203ENST00000502801 LINC00597Q9H2U6 94 aa27.58■■■□□ 2.01
CCDC149-203ENST00000502801 RWDD2AQ9UIY3 292 aa27.58■■■□□ 2.01
CCDC149-203ENST00000502801 FBXO4Q9UKT5 387 aa27.58■■■□□ 2.01
CCDC149-203ENST00000502801 ATG2BQ96BY7 2078 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 COCHO43405 550 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 FGFR1OPO95684 399 aaKnown RBP27.57■■■□□ 2
CCDC149-203ENST00000502801 ACO1P21399 889 aaKnown RBP27.57■■■□□ 2
CCDC149-203ENST00000502801 PGFP49763 221 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 KCNH2Q12809 1159 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 CPA6Q8N4T0 437 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 ATP2A3Q93084 1043 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 IER2Q9BTL4 223 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 CCSER2Q9H7U1 834 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 PNPLA8Q9NP80 782 aa27.57■■■□□ 2
CCDC149-203ENST00000502801 P4HA2O15460 535 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 TBXAS1P24557 533 aaPredicted RBP27.56■■■□□ 2
CCDC149-203ENST00000502801 GJA4P35212 333 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 TUBP50607 506 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 YWHAEP62258 255 aaKnown RBP27.56■■■□□ 2
CCDC149-203ENST00000502801 AMPD2Q01433 879 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 CSTF1Q05048 431 aaKnown RBP27.56■■■□□ 2
CCDC149-203ENST00000502801 CETN1Q12798 172 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 GAS6Q14393 721 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 DGKKQ5KSL6 1271 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 ARHGAP17Q68EM7 881 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 LMO3Q8TAP4 145 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 NT5C1BQ96P26 610 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 MED15Q96RN5 788 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 TLR8Q9NR97 1041 aaKnown RBP27.56■■■□□ 2
CCDC149-203ENST00000502801 SCML2Q9UQR0 700 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 R4GN57 208 aa27.56■■■□□ 2
CCDC149-203ENST00000502801 USP34Q70CQ2 3546 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 CCDC192P0DO97 292 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 CCINQ13939 588 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 MAMSTRQ6ZN01 415 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 UBR7Q8N806 425 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 MLKLQ8NB16 471 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 LMBRD1Q9NUN5 540 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 CFAP97Q9P2B7 532 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.55■■■□□ 2
CCDC149-203ENST00000502801 MYOFQ9NZM1 2061 aa27.55■■■□□ 2
CCDC149-203ENST00000502801 DMDP11532 3685 aa27.54■■■□□ 2
CCDC149-203ENST00000502801 TRDMT1O14717 391 aaKnown RBP27.54■■■□□ 2
CCDC149-203ENST00000502801 GFRA3O60609 400 aa27.54■■■□□ 2
CCDC149-203ENST00000502801 AFPP02771 609 aaKnown RBP27.54■■■□□ 2
CCDC149-203ENST00000502801 KIF11P52732 1056 aa27.54■■■□□ 2
CCDC149-203ENST00000502801 ZNF528Q3MIS6 628 aa27.54■■■□□ 2
CCDC149-203ENST00000502801 TMEM196Q5HYL7 178 aa27.54■■■□□ 2
CCDC149-203ENST00000502801 RIF1Q5UIP0 2472 aaKnown RBP27.54■■■□□ 2
CCDC149-203ENST00000502801 TSSK4Q6SA08 328 aa27.54■■■□□ 2
CCDC149-203ENST00000502801 DDX42Q86XP3 938 aaKnown RBP eCLIP27.54■■■□□ 2
CCDC149-203ENST00000502801 KIAA1958Q8N8K9 716 aa27.54■■■□□ 2
CCDC149-203ENST00000502801 NKD2Q969F2 451 aaPredicted RBP27.54■■■□□ 2
CCDC149-203ENST00000502801 ZFRQ96KR1 1074 aaKnown RBP27.54■■■□□ 2
CCDC149-203ENST00000502801 PRMT8Q9NR22 394 aaPredicted RBP27.54■■■□□ 2
CCDC149-203ENST00000502801 SCAMP3O14828 347 aaKnown RBP27.53■■■□□ 2
CCDC149-203ENST00000502801 CYP26A1O43174 497 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 NR1H3Q13133 447 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 FSTL4Q6MZW2 842 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 Q6ZS52 159 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 ASCL5Q7RTU5 278 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 PPM1KQ8N3J5 372 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 EHBP1Q8NDI1 1231 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 NACA2Q9H009 215 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 NUP62CLQ9H1M0 184 aa27.53■■■□□ 2
CCDC149-203ENST00000502801 FBRSL1Q9HCM7 1045 aaKnown RBP27.53■■■□□ 2
CCDC149-203ENST00000502801 TLR5O60602 858 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 NFATC1O95644 943 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 GALK1P51570 392 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 GRSF1Q12849 480 aaKnown RBP eCLIP27.52■■■□□ 2
CCDC149-203ENST00000502801 SGO2Q562F6 1265 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 NAIF1Q69YI7 327 aaPredicted RBP27.52■■■□□ 2
CCDC149-203ENST00000502801 ZC3H14Q6PJT7 736 aaKnown RBP27.52■■■□□ 2
CCDC149-203ENST00000502801 SPEM1Q8N4L4 309 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 ANKRD52Q8NB46 1076 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 KAT5Q92993 513 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 NMUR1Q9HB89 426 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 OSER1Q9NX31 292 aa27.52■■■□□ 2
CCDC149-203ENST00000502801 PRR23AA6NEV1 266 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms