RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 ITPRIPL1Q6GPH6 555 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 MFSD7Q6UXD7 560 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 REM2Q8IYK8 340 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 THEM5Q8N1Q8 247 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 ANKRD52Q8NB46 1076 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 PITPNM3Q9BZ71 974 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 ERVK-5Q9HDB9 667 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 RHBDL2Q9NX52 303 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 NSMCE4AQ9NXX6 385 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 SCAF8Q9UPN6 1271 aaKnown RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 CCT8L1PA6NM43 557 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 CAPN9O14815 690 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 GPR182O15218 404 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 MMP3P08254 477 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 RPL9P32969 192 aaKnown RBP7.71□□□□□ -1.17
PDGFC-203ENST00000502773 CDKN2BP42772 138 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 USP4Q13107 963 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 GRB14Q14449 540 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 KYNUQ16719 465 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 GOLGA7BQ2TAP0 167 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 EFHC2Q5JST6 749 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 C16orf87Q6PH81 154 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 STRADAQ7RTN6 431 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 GPR142Q7Z601 462 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 WDR75Q8IWA0 830 aaKnown RBP7.71□□□□□ -1.17
PDGFC-203ENST00000502773 RSPH1Q8WYR4 309 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 TRPV6Q9H1D0 765 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 ZNF408Q9H9D4 720 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 NINJ2Q9NZG7 142 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 SLC12A6Q9UHW9 1150 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 SNX9Q9Y5X1 595 aa7.71□□□□□ -1.17
PDGFC-203ENST00000502773 ALDH1A1P00352 501 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 CST3P01034 146 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 HOXD8P13378 290 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 VPS41P49754 854 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 ATP11AP98196 1134 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 ASPHQ12797 758 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 SWT1Q5T5J6 900 aaKnown RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 OLFML2BQ68BL8 750 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 TTC27Q6P3X3 843 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 GBP5Q96PP8 586 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 SIKE1Q9BRV8 207 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 MED10Q9BTT4 135 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 TRABDQ9H4I3 376 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 CHST7Q9NS84 486 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 UMODL1Q5DID0 1318 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 PRPF4O43172 522 aaKnown RBP eCLIP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 NPTXRO95502 500 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 ARF4P18085 180 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 TNFSF9P41273 254 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 NDST1P52848 882 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 BASP1P80723 227 aaKnown RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 OTUD4Q01804 1114 aaKnown RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 TMED2Q15363 201 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 LACTB2Q53H82 288 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 HEATR6Q6AI08 1181 aaKnown RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 CYP4F22Q6NT55 531 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 NANOGNBQ7Z5D8 188 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 XYLT1Q86Y38 959 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 ZBED8Q8IZ13 594 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 C1orf127Q8N9H9 656 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 MCUQ8NE86 351 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 HSPH1Q92598 858 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 UROC1Q96N76 676 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 VAT1Q99536 393 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 XYLT2Q9H1B5 865 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 NGRNQ9NPE2 291 aaKnown RBP7.71□□□□□ -1.18
PDGFC-203ENST00000502773 ZNF711Q9Y462 761 aa7.71□□□□□ -1.18
PDGFC-203ENST00000502773 TMEM120BA0PK00 339 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 ERI2A8K979 691 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 DYNC1LI2O43237 492 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 DARSP14868 501 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 MARCKSL1P49006 195 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CTCFP49711 727 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 PSEN2P49810 448 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 MFSD10Q14728 455 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SIX1Q15475 284 aaPredicted RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 INTS6LQ5JSJ4 861 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SPDYAQ5MJ70 313 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 DENND1BQ6P3S1 775 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 ZNF449Q6P9G9 518 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 RHBDF2Q6PJF5 856 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SPATA21Q7Z572 469 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CRYBG2Q8N1P7 616 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 CCDC63Q8NA47 563 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 OR2W6PQ8NHA6 318 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SLC35B2Q8TB61 432 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 ACTL9Q8TC94 416 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 RXFP2Q8WXD0 754 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 SLC9A7Q96T83 725 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TSPAN16Q9UKR8 245 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 GOLGA8QA0A0J9YX86 632 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 BCLAF3A2AJT9 711 aaKnown RBP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 GOLGA8OA6NCC3 632 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 POC1B-GALNT4F8VUJ3 575 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 GOLGA8NF8WBI6 632 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 IGF2BP3O00425 579 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDGFC-203ENST00000502773 TSPAN1O60635 241 aa7.7□□□□□ -1.18
PDGFC-203ENST00000502773 MLNP12872 115 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms