RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 EDF1O60869 148 aaKnown RBP17.28■□□□□ 0.36
VCAN-204ENST00000502527 GRAP2O75791 330 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 SETSIPP0DME0 302 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 ADCYAP1R1P41586 468 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 SNX16P57768 344 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 RIPK1Q13546 671 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 GRIK4Q16099 956 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 SEPT7Q16181 437 aaKnown RBP17.28■□□□□ 0.36
VCAN-204ENST00000502527 CDO1Q16878 200 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 CCDC14Q49A88 953 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 USP50Q70EL3 339 aaPredicted RBP17.28■□□□□ 0.36
VCAN-204ENST00000502527 ALKBH8Q96BT7 664 aaKnown RBP17.28■□□□□ 0.36
VCAN-204ENST00000502527 PIWIL1Q96J94 861 aaKnown RBP17.28■□□□□ 0.36
VCAN-204ENST00000502527 TBCBQ99426 244 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 NCAPGQ9BPX3 1015 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.28■□□□□ 0.36
VCAN-204ENST00000502527 GRID1Q9ULK0 1009 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 CFAP69A5D8W1 941 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 CHADO15335 359 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 SPAG6O75602 509 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 ATP6V1G2O95670 118 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 SDC4P31431 198 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 SLC8A1P32418 973 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 SKIV2L2P42285 1042 aaKnown RBP17.28■□□□□ 0.36
VCAN-204ENST00000502527 RGS7P49802 495 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 MGAT5Q09328 741 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 SETDB1Q15047 1291 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 C1orf228Q6PIY5 440 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 LVRNQ6Q4G3 990 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 OLFML1Q6UWY5 402 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 PNMA8AQ86V59 439 aaPredicted RBP17.28■□□□□ 0.36
VCAN-204ENST00000502527 PLD5Q8N7P1 536 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 DCAKDQ8WVC6 231 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 USP6NLQ92738 828 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 KLHL29Q96CT2 875 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 ADAM33Q9BZ11 813 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 PAK5Q9P286 719 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 CHMP2BQ9UQN3 213 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 USH1CQ9Y6N9 552 aa17.28■□□□□ 0.36
VCAN-204ENST00000502527 TGM2P21980 687 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 GJA5P36382 358 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 ELK3P41970 407 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 ATP11AP98196 1134 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 SLC6A3Q01959 620 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 KCNJ11Q14654 390 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 RAB6CQ53S08 254 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 MARCH8Q5T0T0 291 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 PPP1R26Q5T8A7 1209 aaPredicted RBP17.27■□□□□ 0.36
VCAN-204ENST00000502527 PMF1Q6P1K2 205 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 SCYL2Q6P3W7 929 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 ZNF467Q7Z7K2 595 aaPredicted RBP17.27■□□□□ 0.36
VCAN-204ENST00000502527 SESTD1Q86VW0 696 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 FAM228AQ86W67 206 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 VSIG1Q86XK7 387 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 MZB1Q8WU39 189 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 SPOCK2Q92563 424 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 FAF2Q96CS3 445 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 SLC4A5Q9BY07 1137 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 FRMD8Q9BZ67 464 aaPredicted RBP17.27■□□□□ 0.36
VCAN-204ENST00000502527 RAB6CQ9H0N0 254 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 UTRNP46939 3433 aa17.27■□□□□ 0.36
VCAN-204ENST00000502527 APOL1O14791 398 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 TM9SF1O15321 606 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 ALDH3A1P30838 453 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 BCAR1P56945 870 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 CBLBQ13191 982 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 PKDCCQ504Y2 493 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 TMEM110Q86TL2 294 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 ACOT1Q86TX2 421 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 FAM172AQ8WUF8 416 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 MRPL45Q9BRJ2 306 aaKnown RBP17.27■□□□□ 0.35
VCAN-204ENST00000502527 KATNBL1Q9H079 304 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 USP29Q9HBJ7 922 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 SLCO1B3Q9NPD5 702 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 NGRNQ9NPE2 291 aaKnown RBP17.27■□□□□ 0.35
VCAN-204ENST00000502527 HESX1Q9UBX0 185 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 SNX9Q9Y5X1 595 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 IKBKGQ9Y6K9 419 aa17.27■□□□□ 0.35
VCAN-204ENST00000502527 IQANK1A0A1B0GTG1 560 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 IGF2BP3O00425 579 aaKnown RBP eCLIP17.26■□□□□ 0.35
VCAN-204ENST00000502527 STRNO43815 780 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 NPTXRO95502 500 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 IL4RP24394 825 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 YARSP54577 528 aaKnown RBP17.26■□□□□ 0.35
VCAN-204ENST00000502527 NRLP54845 237 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 KCNJ2P63252 427 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 LDLRAD1Q5T700 205 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 TTC30AQ86WT1 665 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 ZDHHC17Q8IUH5 632 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 STK32AQ8WU08 396 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 ZNF75CPQ92670 426 aaPredicted RBP17.26■□□□□ 0.35
VCAN-204ENST00000502527 RTP4Q96DX8 246 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 NOD2Q9HC29 1040 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 PCDH18Q9HCL0 1135 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 BAIAP2L1Q9UHR4 511 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 TEX264Q9Y6I9 313 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 SBF1O95248 1867 aa17.26■□□□□ 0.35
VCAN-204ENST00000502527 KCNN4O15554 427 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 ATP5HO75947 161 aa17.25■□□□□ 0.35
VCAN-204ENST00000502527 MT-ND3P03897 115 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms