RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 CST3P01034 146 aaPredicted RBP13.5□□□□□ -0.25
LMNA-218ENST00000502357 KRT18P05783 430 aaKnown RBP13.5□□□□□ -0.25
LMNA-218ENST00000502357 PDGFRBP09619 1106 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 ADH5P11766 374 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 HOXD13P35453 343 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 GRIK1P39086 918 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 DPP6P42658 865 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 PGFP49763 221 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 PDE6CP51160 858 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 KDSRQ06136 332 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 ZNF33AQ06730 810 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 SCAPQ12770 1279 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 TAF10Q12962 218 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 RESTQ13127 1097 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 SNX30Q5VWJ9 437 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 CEP76Q8TAP6 659 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 KCNV2Q8TDN2 545 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 ADAMTS14Q8WXS8 1223 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 SPACA7Q96KW9 195 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 BBC3Q96PG8 261 aaPredicted RBP13.5□□□□□ -0.25
LMNA-218ENST00000502357 ACCSQ96QU6 501 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 ACOX2Q99424 681 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 MRPL45Q9BRJ2 306 aaKnown RBP13.5□□□□□ -0.25
LMNA-218ENST00000502357 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
LMNA-218ENST00000502357 TBC1D7Q9P0N9 293 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 CALCOCO1Q9P1Z2 691 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 ACACAQ13085 2346 aa13.5□□□□□ -0.25
LMNA-218ENST00000502357 SLC9A3R1O14745 358 aaPredicted RBP13.49□□□□□ -0.25
LMNA-218ENST00000502357 AP5Z1O43299 807 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 COCHO43405 550 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 SH3BP5O60239 455 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 TULP3O75386 442 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 LDHAP00338 332 aaKnown RBP13.49□□□□□ -0.25
LMNA-218ENST00000502357 CFIP05156 583 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 KRT19P08727 400 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 ZDHHC11BP0C7U3 371 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 SF3A1Q15459 793 aaKnown RBP13.49□□□□□ -0.25
LMNA-218ENST00000502357 ZNF423Q2M1K9 1284 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 CCNI2Q6ZMN8 369 aaPredicted RBP13.49□□□□□ -0.25
LMNA-218ENST00000502357 PAQR9Q6ZVX9 377 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 TMEM25Q86YD3 366 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 KRI1Q8N9T8 703 aaKnown RBP13.49□□□□□ -0.25
LMNA-218ENST00000502357 GLIS3Q8NEA6 775 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 ZNF419Q96HQ0 510 aaPredicted RBP13.49□□□□□ -0.25
LMNA-218ENST00000502357 HPDLQ96IR7 371 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 TRIM9Q9C026 710 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 DPEP3Q9H4B8 488 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 PCIF1Q9H4Z3 704 aa13.49□□□□□ -0.25
LMNA-218ENST00000502357 MRPL44Q9H9J2 332 aaKnown RBP13.49□□□□□ -0.25
LMNA-218ENST00000502357 A0A087X0B3 334 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 FAM92AA1XBS5 289 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 TRIM66O15016 1216 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 OPHN1O60890 802 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 TACC1O75410 805 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 DKK1O94907 266 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 ADH1CP00326 375 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 FAM163BP0C2L3 166 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 NDUFV2P19404 249 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 GJB2P29033 226 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 RPL6Q02878 288 aaKnown RBP13.48□□□□□ -0.25
LMNA-218ENST00000502357 GAD2Q05329 585 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 GFPT1Q06210 699 aaPredicted RBP13.48□□□□□ -0.25
LMNA-218ENST00000502357 SLC14A1Q13336 389 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 BYSLQ13895 437 aaKnown RBP13.48□□□□□ -0.25
LMNA-218ENST00000502357 MAPRE1Q15691 268 aaKnown RBP13.48□□□□□ -0.25
LMNA-218ENST00000502357 MDH1BQ5I0G3 518 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 C19orf48Q6RUI8 117 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 PDZD3Q86UT5 571 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 CBWD2Q8IUF1 395 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 ZNF513Q8N8E2 541 aaPredicted RBP13.48□□□□□ -0.25
LMNA-218ENST00000502357 NAT16Q8N8M0 369 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 OTUB2Q96DC9 234 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 GABRG3Q99928 467 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
LMNA-218ENST00000502357 B3GNT5Q9BYG0 378 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 ZNF518BQ9C0D4 1074 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
LMNA-218ENST00000502357 TBC1D14Q9P2M4 693 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 STK17AQ9UEE5 414 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 EXOC7Q9UPT5 735 aa13.48□□□□□ -0.25
LMNA-218ENST00000502357 GCN1Q92616 2671 aaKnown RBP13.47□□□□□ -0.25
LMNA-218ENST00000502357 A0A1W2PQD8 194 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.47□□□□□ -0.25
LMNA-218ENST00000502357 PRRT4C9JH25 899 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 CLDN5O00501 218 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 FTH1P19P0C7X4 201 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 MBL2P11226 248 aaPredicted RBP13.47□□□□□ -0.25
LMNA-218ENST00000502357 GAP43P17677 238 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 PTPN1P18031 435 aaKnown RBP13.47□□□□□ -0.25
LMNA-218ENST00000502357 BNC1Q01954 994 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 TRIP6Q15654 476 aaKnown RBP13.47□□□□□ -0.25
LMNA-218ENST00000502357 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 EGFLAMQ63HQ2 1017 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 DBX2Q6ZNG2 339 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 GLRX5Q86SX6 157 aa13.47□□□□□ -0.25
LMNA-218ENST00000502357 BBS7Q8IWZ6 715 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms