RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 TTPALQ9BTX7 342 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 KIFC3Q9BVG8 833 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 GTPBP2Q9BX10 602 aaKnown RBP6.05□□□□□ -1.44
SPTA1-209ENST00000498708 NUSAP1Q9BXS6 441 aaKnown RBP6.05□□□□□ -1.44
SPTA1-209ENST00000498708 TPSD1Q9BZJ3 242 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 TM6SF1Q9BZW5 370 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 TMEM60Q9H2L4 133 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 PDZD7Q9H5P4 517 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 GOLGA2P5Q9HBQ8 144 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 FBRSL1Q9HCM7 1045 aaKnown RBP6.05□□□□□ -1.44
SPTA1-209ENST00000498708 BRMS1Q9HCU9 246 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 ANKEF1Q9NU02 776 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 SRPK3Q9UPE1 567 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 PCDH15Q96QU1 1955 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 NOTCH2Q04721 2471 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 CEP192Q8TEP8 1941 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 MYO16Q9Y6X6 1858 aa6.05□□□□□ -1.44
SPTA1-209ENST00000498708 TSC2P49815 1807 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 SF3B1O75533 1304 aaKnown RBP eCLIP6.04□□□□□ -1.442e-7■■■■■ 44.8
SPTA1-209ENST00000498708 STK36Q9NRP7 1315 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 A0A1B0GUA9 196 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 B8ZZF3 427 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 JAK2O60674 1132 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 RECQL4O94761 1208 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 IGLV1-40P01703 118 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 HARSP12081 509 aaKnown RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 TKTP29401 623 aaKnown RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 CDC25BP30305 580 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 MCM7P33993 719 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 EIF2S3P41091 472 aaKnown RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 PTGER3P43115 390 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 CD97P48960 835 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 CLCNKBP51801 687 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 PRPF4BQ13523 1007 aaKnown RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 TEAD2Q15562 447 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 ZNF174Q15697 407 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 TMEM196Q5HYL7 178 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 PDXDC1Q6P996 788 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 SLC23A3Q6PIS1 610 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 PDZD4Q76G19 769 aaPredicted RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 TMPRSS7Q7RTY8 843 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 DIS3L2Q8IYB7 885 aaKnown RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 FRMD1Q8N878 549 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 ZNF513Q8N8E2 541 aaPredicted RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 DEPTORQ8TB45 409 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 WASF1Q92558 559 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 PMEPA1Q969W9 287 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 UTP4Q969X6 686 aaKnown RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 TMEM209Q96SK2 561 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 ADPGKQ9BRR6 497 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 ADAM19Q9H013 955 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 FZD8Q9H461 694 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 PRMT7Q9NVM4 692 aaPredicted RBP6.04□□□□□ -1.44
SPTA1-209ENST00000498708 EBF1Q9UH73 591 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 CDY1Q9Y6F8 540 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 ZFHX3Q15911 3703 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 ARID2Q68CP9 1835 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 KIAA1549LQ6ZVL6 1849 aa6.04□□□□□ -1.44
SPTA1-209ENST00000498708 ATXN2Q99700 1313 aaKnown RBP6.03□□□□□ -1.44
SPTA1-209ENST00000498708 CREBBPQ92793 2442 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 ARHGEF37A1IGU5 675 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 FAM149AA5PLN7 773 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 ARHGEF35A5YM69 484 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 ZNF197O14709 1029 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 N4BP3O15049 544 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 TLX3O43711 291 aaPredicted RBP6.03□□□□□ -1.44
SPTA1-209ENST00000498708 OPHN1O60890 802 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 ATG13O75143 517 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 B3GAT3O94766 335 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 CLSTN1O94985 981 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 LYPLA2O95372 231 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 SEC24AO95486 1093 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 APBB3O95704 486 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 LRG1P02750 347 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 MYL4P12829 197 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 EPHA1P21709 976 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 SSTR4P31391 388 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 ELF1P32519 619 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 POU5F1BQ06416 359 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 TRIM29Q14134 588 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 PCBP1Q15365 356 aaKnown RBP eCLIP6.03□□□□□ -1.44
SPTA1-209ENST00000498708 MAPK6Q16659 721 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 ME3Q16798 604 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 NAIF1Q69YI7 327 aaPredicted RBP6.03□□□□□ -1.44
SPTA1-209ENST00000498708 XKR5Q6UX68 686 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 RTL10Q7L3V2 364 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 CATSPER3Q86XQ3 398 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 SYT12Q8IV01 421 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 FMNL3Q8IVF7 1028 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 MINDY1Q8N5J2 469 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 RPLP0P6Q8NHW5 317 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 FAM46AQ96IP4 442 aaKnown RBP6.03□□□□□ -1.44
SPTA1-209ENST00000498708 MTMR9Q96QG7 549 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 SEPT3Q9UH03 358 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 FBN2P35556 2912 aa6.03□□□□□ -1.44
SPTA1-209ENST00000498708 ITPR3Q14573 2671 aa6.02□□□□□ -1.44
SPTA1-209ENST00000498708 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 TEX51A0A1B0GUA7 166 aa6.02□□□□□ -1.45
SPTA1-209ENST00000498708 ANTXRLA6NF34 631 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms