RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 RNF38Q9H0F5 515 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 TBC1D14Q9P2M4 693 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 SUSD2Q9UGT4 822 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 ITGA11Q9UKX5 1188 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 SH3BP1Q9Y3L3 701 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 A0A1W2PQD8 194 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 ZNF840PA6NDX5 716 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 DDIT3P35638 169 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 PPP3CCP48454 512 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 WNT7BP56706 349 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 RBP5P82980 135 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 POU5F1Q01860 360 aaKnown RBP12.44□□□□□ -0.42
CDK9-205ENST00000498339 MYO1EQ12965 1108 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 GRIK2Q13002 908 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 TDRD10Q5VZ19 366 aaKnown RBP12.44□□□□□ -0.42
CDK9-205ENST00000498339 SDE2Q6IQ49 451 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 KIAA1324Q6UXG2 1013 aaKnown RBP12.44□□□□□ -0.42
CDK9-205ENST00000498339 HS2ST1Q7LGA3 356 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 SLC41A1Q8IVJ1 513 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 CHPFQ8IZ52 775 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 KRI1Q8N9T8 703 aaKnown RBP12.44□□□□□ -0.42
CDK9-205ENST00000498339 RAD54LQ92698 747 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 BBC3Q96PG8 261 aaPredicted RBP12.44□□□□□ -0.42
CDK9-205ENST00000498339 SLITRK1Q96PX8 696 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 MTMR12Q9C0I1 747 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 FAM124BQ9H5Z6 455 aaPredicted RBP12.44□□□□□ -0.42
CDK9-205ENST00000498339 GDAP2Q9NXN4 497 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 DEC1Q9P2X7 70 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 CDH9Q9ULB4 789 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 EXOC7Q9UPT5 735 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 STYXL1Q9Y6J8 313 aa12.44□□□□□ -0.42
CDK9-205ENST00000498339 IGSF10Q6WRI0 2623 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 TMEM131Q92545 1883 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 GOLGA8IPA6NC78 632 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 GOLGA8JA6NMD2 632 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 F8VP50 259 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 GABRDO14764 452 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 OAS1P00973 400 aaKnown RBP12.43□□□□□ -0.42
CDK9-205ENST00000498339 PDGFRBP09619 1106 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
CDK9-205ENST00000498339 NDUFV2P19404 249 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 NTSR1P30989 418 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 TAF10Q12962 218 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 SOWAHAQ2M3V2 549 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 MDH1BQ5I0G3 518 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 ARL6IP4Q66PJ3 421 aaKnown RBP12.43□□□□□ -0.42
CDK9-205ENST00000498339 FAM171BQ6P995 826 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 TOGARAM2Q6ZUX3 1019 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 SFR1Q86XK3 245 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 SYCP3Q8IZU3 236 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 KIAA1958Q8N8K9 716 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 TERB1Q8NA31 727 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 HVCN1Q96D96 273 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 ANKRD36BP1Q96IX9 119 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 AK8Q96MA6 479 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 CEP295NLQ96MC4 621 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 FIZ1Q96SL8 496 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 MMS19Q96T76 1030 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 NACA2Q9H009 215 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 MIR1-1HGQ9H1L0 117 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 MRPL44Q9H9J2 332 aaKnown RBP12.43□□□□□ -0.42
CDK9-205ENST00000498339 CRTAC1Q9NQ79 661 aa12.43□□□□□ -0.42
CDK9-205ENST00000498339 TP53BP1Q12888 1972 aaPredicted RBP12.42□□□□□ -0.42
CDK9-205ENST00000498339 E2F8A0AVK6 867 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 SLC26A4O43511 780 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 TULP3O75386 442 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 OLFM2O95897 454 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 IRF1P10914 325 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 LMO2P25791 158 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 MAOBP27338 520 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 ADSSP30520 456 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 NOP14P78316 857 aaKnown RBP12.42□□□□□ -0.42
CDK9-205ENST00000498339 WDR45BQ5MNZ6 344 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 EGFLAMQ63HQ2 1017 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 SCARA3Q6AZY7 606 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 GRAMD4Q6IC98 578 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 DYMQ7RTS9 669 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 PHTF2Q8N3S3 785 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 ZSWIM2Q8NEG5 633 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 KCNV2Q8TDN2 545 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 IPO4Q8TEX9 1081 aaKnown RBP12.42□□□□□ -0.42
CDK9-205ENST00000498339 SCFD1Q8WVM8 642 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 LARP4BQ92615 738 aaKnown RBP12.42□□□□□ -0.42
CDK9-205ENST00000498339 FOXJ1Q92949 421 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 PCED1BQ96HM7 432 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 HPDLQ96IR7 371 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 ZSCAN31Q96LW9 406 aaPredicted RBP12.42□□□□□ -0.42
CDK9-205ENST00000498339 ACCSQ96QU6 501 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 TTLL2Q9BWV7 592 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 SLC6A17Q9H1V8 727 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 CD93Q9NPY3 652 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 SCUBE2Q9NQ36 999 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 BLOC1S4Q9NUP1 217 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 DNAJC17Q9NVM6 304 aaKnown RBP12.42□□□□□ -0.42
CDK9-205ENST00000498339 TBC1D7Q9P0N9 293 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 KIF3AQ9Y496 699 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 RAD54BQ9Y620 910 aa12.42□□□□□ -0.42
CDK9-205ENST00000498339 A0A0A0MRY4 1105 aa12.41□□□□□ -0.42
CDK9-205ENST00000498339 HOXC11O43248 304 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms