RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 LTV1Q96GA3 475 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 ZNF496Q96IT1 587 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 FGD4Q96M96 766 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CYP2S1Q96SQ9 504 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SDF4Q9BRK5 362 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 FAM167BQ9BTA0 163 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MAGEB5Q9BZ81 275 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 UNKQ9C0B0 810 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CEP44Q9C0F1 390 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ENKD1Q9H0I2 346 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ATXN3LQ9H3M9 355 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SOX17Q9H6I2 414 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CAB39LQ9H9S4 337 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PCDH9Q9HC56 1237 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TAS2R9Q9NYW1 312 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MARCH2Q9P0N8 246 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SCHIP1Q9P0W5 487 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 APOBEC2Q9Y235 224 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 PTPN22Q9Y2R2 807 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 UBIAD1Q9Y5Z9 338 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SPTAN1Q13813 2472 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 ANKHD1Q8IWZ3 2542 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 TRAV8-3A0A0A6YYJ7 113 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SMCO3A2RU48 225 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 AP4M1O00189 453 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 YY2O15391 372 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 P4HA2O15460 535 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PHACTR2O75167 634 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 MAFO75444 373 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 SASH3O75995 380 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 FARP2O94887 1054 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 VNN2O95498 520 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ERBB2P04626 1255 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KLK3P07288 261 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 PDHA1P08559 390 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CBSLP0DN79 551 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 HGFP14210 728 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CBSP35520 551 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 OR3A3P47888 321 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PCYT1AP49585 367 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CXADRP78310 365 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 NOP14P78316 857 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 GPLD1P80108 840 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 RUNX1T1Q06455 604 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SREBF2Q12772 1141 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 BNIP3Q12983 259 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SP140Q13342 867 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ADGRE1Q14246 886 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 GAB4Q2WGN9 574 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 C5orf22Q49AR2 442 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 IQCCQ4KMZ1 466 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SMUG1Q53HV7 270 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ASPRV1Q53RT3 343 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TCHHL1Q5QJ38 904 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CELF3Q5SZQ8 465 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 SCARA3Q6AZY7 606 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PPP1R21Q6ZMI0 780 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SYDE1Q6ZW31 735 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 CAMKMTQ7Z624 323 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TECPR1Q7Z6L1 1165 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 VSIG10LQ86VR7 867 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 THOC6Q86W42 341 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 TRIM42Q8IWZ5 723 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SIX5Q8N196 739 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CRYBG2Q8N1P7 616 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SPATA6LQ8N4H0 392 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 KBTBD3Q8NAB2 608 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 FBXL13Q8NEE6 735 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLC22A8Q8TCC7 542 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 PLAC4Q8WY50 150 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 TXNDC15Q96J42 360 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CXorf58Q96LI9 332 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLITRK1Q96PX8 696 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 BAG1Q99933 345 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 LGR4Q9BXB1 951 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 RBCK1Q9BYM8 510 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLC39A8Q9C0K1 460 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 RANBP17Q9H2T7 1088 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 TAF1DQ9H5J8 278 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 MAGEF1Q9HAY2 307 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ETNK1Q9HBU6 452 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CWC25Q9NXE8 425 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 PIM2Q9P1W9 311 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 DBF4Q9UBU7 674 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 PCOLCE2Q9UKZ9 415 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 ARHGAP26Q9UNA1 814 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 CAB39Q9Y376 341 aaPredicted RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 ZNF711Q9Y462 761 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 SLC4A4Q9Y6R1 1079 aa1.53□□□□□ -2.16
XRN1-214ENST00000498077 EIF2AK4Q9P2K8 1649 aaKnown RBP1.53□□□□□ -2.16
XRN1-214ENST00000498077 PNMA6FA0A0J9YX94 578 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 CLPSL1A2RUU4 121 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 SLC22A31A6NKX4 558 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 DUXAA6NLW8 204 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 A8MXQ7 604 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 E5RGE8 158 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 LINC01387J3KSC0 135 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 SMARCA5O60264 1052 aaPredicted RBP1.53□□□□□ -2.17
XRN1-214ENST00000498077 XYLBO75191 536 aa1.53□□□□□ -2.17
XRN1-214ENST00000498077 ZNF217O75362 1048 aa1.53□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms