RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 ITGB8P26012 769 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SREBF1P36956 1147 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 RAD52P43351 418 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 STT3AP46977 705 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SLC5A3P53794 718 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 GP2P55259 537 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SRSF2Q01130 221 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 ALDH6A1Q02252 535 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 BNIP3Q12983 259 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 ITGA7Q13683 1181 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 PDCD1Q15116 288 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 NPY5RQ15761 445 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 CELF3Q5SZQ8 465 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 TMEM63BQ5T3F8 832 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 ITPRIPL1Q6GPH6 555 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 MFSD5Q6N075 450 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 METTL7BQ6UX53 244 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 CXCL17Q6UXB2 119 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SYNE3Q6ZMZ3 975 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 NFXL1Q6ZNB6 911 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 TMPRSS7Q7RTY8 843 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 DAGLBQ8NCG7 672 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 OR6J1Q8NGC5 347 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 ZSCAN18Q8TBC5 510 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 KAT2BQ92831 832 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 CDHR1Q96JP9 859 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 PKNOX2Q96KN3 472 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 TCEANC2Q96MN5 208 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 JAKMIP1Q96N16 626 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 ELF4Q99607 663 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 MTG1Q9BT17 334 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 TTLL2Q9BWV7 592 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 DUSP15Q9H1R2 295 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SMYD2Q9NRG4 433 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 LMCD1Q9NZU5 365 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SLC13A4Q9UKG4 626 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 ZMYND8Q9ULU4 1186 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 CORO2BQ9UQ03 480 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 BACE2Q9Y5Z0 518 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 UBIAD1Q9Y5Z9 338 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 NFASCO94856 1347 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 STK36Q9NRP7 1315 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 H3BS24 57 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 EDIL3O43854 480 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 B4GALT4O60513 344 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 LRRN2O75325 713 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 GFPT2O94808 682 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 PFKMP08237 780 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 CYP3A4P08684 503 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 SUPT20HL2P0C7V6 817 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 CD8BP10966 210 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 SCG2P13521 617 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 CPA1P15085 419 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 KCNA2P16389 499 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 RXRAP19793 462 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 PDIA3P30101 505 aaKnown RBP6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 HOXA13P31271 388 aaPredicted RBP6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 CIITAP33076 1130 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 METAP2P50579 478 aaKnown RBP eCLIP6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 ADAM17P78536 824 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 IRF9Q00978 393 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 BEX3Q00994 111 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 NEDD9Q14511 834 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 DGKDQ16760 1214 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 TOR2AQ5JU69 321 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 CWF19L1Q69YN2 538 aaKnown RBP6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 USP17L6PQ6QN14 398 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 DSTYKQ6XUX3 929 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 Q6ZUG5 572 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 MAEAQ7L5Y9 396 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 SPRED2Q7Z698 418 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 RPAINQ86UA6 219 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 WFDC3Q8IUB2 231 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 TP53INP2Q8IXH6 220 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 NKAIN3Q8N8D7 197 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 PCYOX1LQ8NBM8 494 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 CAGE1Q8TC20 777 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 CUL5Q93034 780 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 UBE2FQ969M7 185 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 APIPQ96GX9 242 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 C16orf70Q9BSU1 422 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 KATNAL1Q9BW62 490 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 PRDM14Q9GZV8 571 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 IPPKQ9H8X2 491 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 PSTPIP2Q9H939 334 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 PLEKHA5Q9HAU0 1116 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 SP110Q9HB58 689 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 VAT1LQ9HCJ6 419 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 WASH6PQ9NQA3 447 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 GFOD1Q9NXC2 390 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 FBXO10Q9UK96 956 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 ATP11BQ9Y2G3 1177 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 EMSYQ7Z589 1322 aa6.45□□□□□ -1.38
TMEM39A-212ENST00000497993 IGLV3-22A0A075B6J6 115 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 C2orf71A6NGG8 1288 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 B4E171 279 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 FRS3O43559 492 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 NCK2O43639 380 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 PLOD3O60568 738 aa6.44□□□□□ -1.38
TMEM39A-212ENST00000497993 MYF5P13349 255 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms