RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 EPC1Q9H2F5 836 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 ANKZF1Q9H8Y5 726 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 FAM105AQ9NUU6 356 aa20.85■□□□□ 0.93
ACTN4-208ENST00000497637 CHORDC1Q9UHD1 332 aaPredicted RBP20.85■□□□□ 0.93
ACTN4-208ENST00000497637 TTC7AQ9ULT0 858 aaPredicted RBP20.85■□□□□ 0.93
ACTN4-208ENST00000497637 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.85■□□□□ 0.93
ACTN4-208ENST00000497637 COMTP21964 271 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 CTNNA2P26232 953 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 PNPLA4P41247 253 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 DSC3Q14574 896 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 CNGA2Q16280 664 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 ZNF528Q3MIS6 628 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 GLRA4Q5JXX5 417 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 DENND1BQ6P3S1 775 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 FBXO38Q6PIJ6 1188 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 MMS22LQ6ZRQ5 1243 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 SLC39A11Q8N1S5 342 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 PDCL2Q8N4E4 241 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 WDTC1Q8N5D0 677 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 ZNF560Q96MR9 790 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 TRAIPQ9BWF2 469 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 ARGLU1Q9NWB6 273 aaPredicted RBP20.84■□□□□ 0.93
ACTN4-208ENST00000497637 RAB21Q9UL25 225 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 CEP83Q9Y592 693 aa20.84■□□□□ 0.93
ACTN4-208ENST00000497637 CITO14578 2027 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.83■□□□□ 0.93
ACTN4-208ENST00000497637 TMEM110-MUSTN1A8MSY1 372 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 PPEF2O14830 753 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 CEP104O60308 925 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 ITGA4P13612 1032 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 LRPAP1P30533 357 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 PBX3P40426 434 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 C2orf54Q08AI8 447 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 BRD3Q15059 726 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 SLC22A17Q8WUG5 538 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 CD101Q93033 1021 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 TMEM169Q96HH4 297 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 MRPL47Q9HD33 250 aaKnown RBP20.83■□□□□ 0.93
ACTN4-208ENST00000497637 SMARCAL1Q9NZC9 954 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 EHD2Q9NZN4 543 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 DLGAP2Q9P1A6 1054 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 SCINQ9Y6U3 715 aa20.83■□□□□ 0.93
ACTN4-208ENST00000497637 TARSL2A2RTX5 802 aaKnown RBP20.82■□□□□ 0.92
ACTN4-208ENST00000497637 SPDYE4A6NLX3 237 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 ZNF623O75123 536 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 DCNP07585 359 aaKnown RBP20.82■□□□□ 0.92
ACTN4-208ENST00000497637 FAM163BP0C2L3 166 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 RHOXF2BP0C7M4 288 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 SRFP11831 508 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 EPCAMP16422 314 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 SLC1A1P43005 524 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 NDST1P52848 882 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 MAMLD1Q13495 774 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 UBL4BQ8N7F7 174 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 C1orf131Q8NDD1 294 aaKnown RBP20.82■□□□□ 0.92
ACTN4-208ENST00000497637 PPP1R10Q96QC0 940 aaKnown RBP20.82■□□□□ 0.92
ACTN4-208ENST00000497637 RHOXF2Q9BQY4 288 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 NT5C1AQ9BXI3 368 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 CARD9Q9H257 536 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 SLC38A7Q9NVC3 462 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 GDAP2Q9NXN4 497 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 HMGXB4Q9UGU5 601 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 TMEM59LQ9UK28 342 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 GIT1Q9Y2X7 761 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 SNX9Q9Y5X1 595 aa20.82■□□□□ 0.92
ACTN4-208ENST00000497637 TCRBV5S1A1TA0A578 114 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 PTGESO14684 152 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 NARSO43776 548 aaKnown RBP20.81■□□□□ 0.92
ACTN4-208ENST00000497637 RAB27AP51159 221 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 STILQ15468 1287 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 SGO2Q562F6 1265 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 CCDC70Q6NSX1 233 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 LIMS2Q7Z4I7 341 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 UNC93AQ86WB7 457 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 ERICH1Q86X53 443 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 VPS52Q8N1B4 723 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 FEZF2Q8TBJ5 459 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 BTBD6Q96KE9 485 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 HEXIM2Q96MH2 286 aaKnown RBP20.81■□□□□ 0.92
ACTN4-208ENST00000497637 MRPL45Q9BRJ2 306 aaKnown RBP20.81■□□□□ 0.92
ACTN4-208ENST00000497637 PARVAQ9NVD7 372 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 LCMT1Q9UIC8 334 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 ANAPC7Q9UJX3 599 aa20.81■□□□□ 0.92
ACTN4-208ENST00000497637 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.81■□□□□ 0.92
ACTN4-208ENST00000497637 ANKRD11Q6UB99 2663 aaPredicted RBP20.81■□□□□ 0.92
ACTN4-208ENST00000497637 CACNA1IQ9P0X4 2223 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 MYO1FO00160 1098 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 PGRMC1O00264 195 aaKnown RBP20.8■□□□□ 0.92
ACTN4-208ENST00000497637 O00370 1275 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 MICAL2O94851 1124 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 TAF6P49848 677 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 PEX5P50542 639 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 CLCN6P51797 869 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 SOX4Q06945 474 aaPredicted RBP20.8■□□□□ 0.92
ACTN4-208ENST00000497637 GLE1Q53GS7 698 aaKnown RBP20.8■□□□□ 0.92
ACTN4-208ENST00000497637 LCLAT1Q6UWP7 414 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 RSPH1Q8WYR4 309 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 MRPL9Q9BYD2 267 aaKnown RBP20.8■□□□□ 0.92
ACTN4-208ENST00000497637 RNF19AQ9NV58 838 aa20.8■□□□□ 0.92
ACTN4-208ENST00000497637 FBXO4Q9UKT5 387 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms