RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 KMOO15229 486 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NCK2O43639 380 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 DLX3O60479 287 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CCNT1O60563 726 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NIPSNAP2O75323 286 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SUPT3HO75486 399 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 S100A9P06702 114 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ALOX5P09917 674 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 COL6A2P12110 1019 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 HSD3B1P14060 373 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PRKACAP17612 351 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 JAK1P23458 1154 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CCND1P24385 295 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ALDH3A1P30838 453 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC8A1P32418 973 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 LSP1P33241 339 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 HNF4AP41235 474 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 LMAN1P49257 510 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NLRP5P59047 1200 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 POLR2GP62487 172 aaKnown RBP eCLIP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SULT2A1Q06520 285 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 TRPC3Q13507 836 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NR0B2Q15466 257 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 KCNA10Q16322 511 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NDUFA5Q16718 116 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 AARDQ4LEZ3 155 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SIGIRRQ6IA17 410 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 GRAMD4Q6IC98 578 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 RAB12Q6IQ22 244 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 FSTL4Q6MZW2 842 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 BORAQ6PGQ7 559 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 MAMDC2Q7Z304 686 aaPredicted RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NUP54Q7Z3B4 507 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NECAB2Q7Z6G3 386 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 GALNT7Q86SF2 657 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ZNF554Q86TJ5 538 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 VPS36Q86VN1 386 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CILP2Q8IUL8 1156 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 P3H2Q8IVL5 708 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PPM1NQ8N819 430 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC4A11Q8NBS3 891 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SSH3Q8TE77 659 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 MAIP1Q8WWC4 291 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 KCTD13Q8WZ19 329 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 GFM2Q969S9 779 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 EFHD2Q96C19 240 aaPredicted RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 MED30Q96HR3 178 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 RCC1LQ96I51 464 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 EXOC2Q96KP1 924 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CCDC42Q96M95 316 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 MPHOSPH8Q99549 860 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CIB1Q99828 191 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 NUSAP1Q9BXS6 441 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CCSER1Q9C0I3 900 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 VPS16Q9H269 839 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 WDR6Q9NNW5 1121 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SLC39A2Q9NP94 309 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 TRPM5Q9NZQ8 1165 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 KIF17Q9P2E2 1029 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 DBR1Q9UK59 544 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 BAG5Q9UL15 447 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 VANGL2Q9ULK5 521 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SMG5Q9UPR3 1016 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SF3B6Q9Y3B4 125 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CHTOPQ9Y3Y2 248 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 A0A1B0GVC2 190 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 MACROD2A1Z1Q3 448 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 KIF28PB7ZC32 967 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CAPN9O14815 690 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 IKBKBO14920 756 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PRODHO43272 600 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 SPOPO43791 374 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 BRINP1O60477 761 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ALDH1A2O94788 518 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 FARP2O94887 1054 aaPredicted RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 GOSR1O95249 250 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 TBC1D8O95759 1140 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 RETP07949 1114 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PDHBP11177 359 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ATP1A3P13637 1013 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ATF2P15336 505 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 EIF2S2P20042 333 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PPP1R2P41236 205 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 STAT1P42224 750 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 RGS19P49795 217 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 CLCN4P51793 760 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 TKTL1P51854 596 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 LINC00310P59036 64 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 HAND2P61296 217 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 ST5P78524 1137 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 STAT4Q14765 748 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 RTP5Q14D33 572 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 KRTCAP3Q53RY4 240 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 FBXO48Q5FWF7 155 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PPP6R3Q5H9R7 873 aaPredicted RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 RBM20Q5T481 1227 aaKnown RBP3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 PPP1R2P3Q6NXS1 205 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 C6orf89Q6UWU4 347 aa3.27□□□□□ -1.89
SNRNP48-202ENST00000496946 RGS9BPQ6ZS82 235 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms