RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
CLDN12-213ENST00000496677 CPQQ9Y646 472 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
CLDN12-213ENST00000496677 GOLGA6L4A6NEF3 574 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 CETN3O15182 167 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 COCHO43405 550 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 HRO43593 1189 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 CILPO75339 1184 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 DRD1P21728 446 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 TGM1P22735 817 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 OPRD1P41143 372 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 FNTBP49356 437 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 TUBP50607 506 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 PPP2R5DQ14738 602 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 FBXO32Q969P5 355 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 CYFIP2Q96F07 1278 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
CLDN12-213ENST00000496677 P2RY13Q9BPV8 354 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 NT5C1AQ9BXI3 368 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 GMIPQ9P107 970 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
CLDN12-213ENST00000496677 SMC2O95347 1197 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 ABL1P00519 1130 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
CLDN12-213ENST00000496677 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
CLDN12-213ENST00000496677 BMP6P22004 513 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 MAP3K7CLP57077 242 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 FKBP3Q00688 224 aaKnown RBP13.1□□□□□ -0.31
CLDN12-213ENST00000496677 HECTD3Q5T447 861 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 FILIP1Q7Z7B0 1213 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 WDR5BQ86VZ2 330 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 FBXL13Q8NEE6 735 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 TATDN2Q93075 761 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 SMARCE1Q969G3 411 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 GTPBP4Q9BZE4 634 aaKnown RBP13.1□□□□□ -0.31
CLDN12-213ENST00000496677 CCSER2Q9H7U1 834 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 SMPD4Q9NXE4 827 aa13.1□□□□□ -0.31
CLDN12-213ENST00000496677 SMG5Q9UPR3 1016 aaKnown RBP13.1□□□□□ -0.31
CLDN12-213ENST00000496677 DCHS1Q96JQ0 3298 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 E2F8A0AVK6 867 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 TRIM49BA6NDI0 452 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 SLC16A3O15427 465 aaKnown RBP13.09□□□□□ -0.31
CLDN12-213ENST00000496677 GREM1O60565 184 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 RNF40O75150 1001 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 GADD45BO75293 160 aaPredicted RBP13.09□□□□□ -0.31
CLDN12-213ENST00000496677 NFATC1O95644 943 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 CYP17A1P05093 508 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 EPB41P11171 864 aaKnown RBP13.09□□□□□ -0.31
CLDN12-213ENST00000496677 CD58P19256 250 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 MXI1P50539 228 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 RAD23BP54727 409 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 LRRC63Q05C16 580 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
CLDN12-213ENST00000496677 NR1H3Q13133 447 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 FBXO43Q4G163 708 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 RHBDF2Q6PJF5 856 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 LONP2Q86WA8 852 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 TTC16Q8NEE8 873 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 CD101Q93033 1021 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 WBP2Q969T9 261 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 IMPG2Q9BZV3 1241 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 FBXO44Q9H4M3 255 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 MMRN2Q9H8L6 949 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 PNPLA8Q9NP80 782 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 POLR3BQ9NW08 1133 aaPredicted RBP13.09□□□□□ -0.31
CLDN12-213ENST00000496677 OSER1Q9NX31 292 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 CFAP97Q9P2B7 532 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 MAN1B1Q9UKM7 699 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 SCML2Q9UQR0 700 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
CLDN12-213ENST00000496677 CEP250Q9BV73 2442 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 A0A0A0MRY4 1105 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 CCDC163A0A0D9SF12 145 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 ANTXRLA6NF34 631 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 PPP1R3GB7ZBB8 358 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 K7EQS6 105 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 SLC9A3R1O14745 358 aaPredicted RBP13.08□□□□□ -0.32
CLDN12-213ENST00000496677 STX10O60499 249 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 ATG13O75143 517 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 FAM200BP0CF97 657 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
CLDN12-213ENST00000496677 ADORA2BP29275 332 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 CNR2P34972 360 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 KIF11P52732 1056 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 MESP2Q0VG99 397 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 SRSF5Q13243 272 aaKnown RBP13.08□□□□□ -0.32
CLDN12-213ENST00000496677 DHCR24Q15392 516 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
CLDN12-213ENST00000496677 FOXR2Q6PJQ5 311 aa13.08□□□□□ -0.32
CLDN12-213ENST00000496677 DDX42Q86XP3 938 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLDN12-213ENST00000496677 KIAA2013Q8IYS2 634 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms