RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 CCNCP24863 283 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 IL12RB1P42701 662 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 SLC18A1P54219 525 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 UBE3CQ15386 1083 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 TLR1Q15399 786 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 FAM209AQ5JX71 171 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 RFPL4BQ6ZWI9 263 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 PCGF5Q86SE9 256 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 GALNT7Q86SF2 657 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 PRUNE1Q86TP1 453 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 PRELID2Q8N945 189 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 ZNF420Q8TAQ5 688 aaPredicted RBP8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 LRRC20Q8TCA0 184 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 PSPC1Q8WXF1 523 aaKnown RBP8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 LRRC39Q96DD0 335 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 PTCD3Q96EY7 689 aaKnown RBP8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 B3GALT6Q96L58 329 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 CEPT1Q9Y6K0 416 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 NUMBLQ9Y6R0 609 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 TULP4Q9NRJ4 1543 aa8.48□□□□□ -1.05
CRNKL1-205ENST00000496549 FOXO6A8MYZ6 492 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 UBE2Q2LH0YL09 131 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 DDAH1O94760 285 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 COMTP21964 271 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 PCSK6P29122 969 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 NUDT2P50583 147 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 NLRP11P59045 1033 aaKnown RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 CHI3L2Q15782 390 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 PCSK7Q16549 785 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 PGS1Q32NB8 556 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SPARTQ8N0X7 666 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 MAGEB6Q8N7X4 407 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 TRIM15Q9C019 465 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 OR2B2Q9GZK3 357 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 CDH19Q9H159 772 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 NEK6Q9HC98 313 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 MRPL39Q9NYK5 338 aaKnown RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 IPPQ9Y573 584 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 B8ZZF3 427 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SGK1O00141 431 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 AKAP10O43572 662 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SERPINA6P08185 405 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 C6orf222P0C671 652 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ENO3P13929 434 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SOX5P35711 763 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 GRIA2P42262 883 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SERPINH1P50454 418 aaKnown RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 VAC14Q08AM6 782 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SF3B4Q15427 424 aaKnown RBP eCLIP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SLC1A5Q15758 541 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 HIF1AQ16665 826 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 AASDHQ4L235 1098 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 COBLL1Q53SF7 1204 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 DGKHQ86XP1 1220 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ANKK1Q8NFD2 765 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 RSAD2Q8WXG1 361 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 GLMNQ92990 594 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SDCCAG3Q96C92 435 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ZNF486Q96H40 463 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 NEURL2Q9BR09 285 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 MTG1Q9BT17 334 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 THAP1Q9NVV9 213 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 RAB20Q9NX57 234 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 TBX22Q9Y458 520 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SNX13Q9Y5W8 968 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 MYO3BQ8WXR4 1341 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 COL15A1P39059 1388 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ADGRB3O60242 1522 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 CHMP2AO43633 222 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ZC3H11AO75152 810 aaKnown RBP eCLIP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 FTLP02792 175 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ATF7P17544 494 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 BDNFP23560 247 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 MAPK10P53779 464 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ATXN3P54252 364 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 TNFAIP2Q03169 654 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SCRN3Q0VDG4 424 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 DGUOKQ16854 277 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 LIN9Q5TKA1 542 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 CGB2Q6NT52 195 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 GPBP1Q86WP2 473 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 PLD3Q8IV08 490 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 BRSK2Q8IWQ3 736 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SNX31Q8N9S9 440 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 POC5Q8NA72 575 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 PCYOX1LQ8NBM8 494 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ZNF564Q8TBZ8 553 aaPredicted RBP8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 KCNN1Q92952 543 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 PSKH2Q96QS6 385 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 RMND5AQ9H871 391 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ARMT1Q9H993 441 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 ERVK-5Q9HDB9 667 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 SACM1LQ9NTJ5 587 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 FBXO28Q9NVF7 368 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 MYH7P12883 1935 aa8.47□□□□□ -1.05
CRNKL1-205ENST00000496549 GAS2O43903 313 aaKnown RBP8.46□□□□□ -1.05
CRNKL1-205ENST00000496549 SLC5A1P13866 664 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms