RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ANKRD54Q6NXT1 300 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 GJB7Q6PEY0 223 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SECISBP2LQ93073 1101 aaKnown RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SHDQ96IW2 340 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 MFSD1Q9H3U5 465 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 TASP1Q9H6P5 420 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 NHEJ1Q9H9Q4 299 aaPredicted RBP9.05□□□□□ -0.96
U2AF1-212ENST00000496462 SIK3Q9Y2K2 1263 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 HCFC2Q9Y5Z7 792 aa9.05□□□□□ -0.96
U2AF1-212ENST00000496462 PRUNE2Q8WUY3 3088 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 SLC12A8A0AV02 714 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 O00370 1275 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 PDGFRAP16234 1089 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 NFKBIAP25963 317 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 GJC1P36383 396 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 ADIGQ0VDE8 80 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 SMAD4Q13485 552 aaKnown RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 RABGAP1LQ5R372 815 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 ULBP1Q9BZM6 244 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 APOBEC3GQ9HC16 384 aaKnown RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 CACNG4Q9UBN1 327 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 PCDHGC3Q9UN70 934 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 TCHHQ07283 1943 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 CDH23Q9H251 3354 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 GABRDO14764 452 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 STK10O94804 968 aaKnown RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 ARHGEF15O94989 841 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 ERBB2P04626 1255 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 TNNT1P13805 278 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 ZNF135P52742 658 aaPredicted RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 PPP1R26Q5T8A7 1209 aaPredicted RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 SEL1L2Q5TEA6 688 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 CCDC50Q8IVM0 306 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 SLC4A11Q8NBS3 891 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 PLEKHO2Q8TD55 490 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 EPAS1Q99814 870 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 CLSTN3Q9BQT9 956 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 POPDC2Q9HBU9 364 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 WDR6Q9NNW5 1121 aaKnown RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 INTUQ9ULD6 942 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 MYH11P35749 1972 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 SPTLC1O15269 473 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 NFATC1O95644 943 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 YWHAGP61981 247 aaKnown RBP eCLIP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 MRPS5P82675 430 aaKnown RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 EFEMP1Q12805 493 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 TAF10Q12962 218 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 ADGRE1Q14246 886 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 PIGHQ14442 188 aaPredicted RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 DCAF6Q58WW2 860 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 RNF19BQ6ZMZ0 732 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 MMS22LQ6ZRQ5 1243 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 BZW1Q7L1Q6 419 aaKnown RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 OSTM1Q86WC4 334 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 CPA6Q8N4T0 437 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 PRDM6Q9NQX0 595 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 GDE1Q9NZC3 331 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 MARCH2Q9P0N8 246 aa9.04□□□□□ -0.96
U2AF1-212ENST00000496462 FARP1Q9Y4F1 1045 aaPredicted RBP9.04□□□□□ -0.96
U2AF1-212ENST00000496462 ZNF263O14978 683 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 KRT7P08729 469 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 RARGP13631 454 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 GPD1P21695 349 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 LMO2P25791 158 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 PAFAH1B1P43034 410 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 AFF1P51825 1210 aaKnown RBP9.03□□□□□ -0.96
U2AF1-212ENST00000496462 SLC5A3P53794 718 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 SLC6A3Q01959 620 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 NAP1L3Q99457 506 aaPredicted RBP9.03□□□□□ -0.96
U2AF1-212ENST00000496462 B3GNT5Q9BYG0 378 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 GANQ9H2C0 597 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 BRD9Q9H8M2 597 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 AMFRQ9UKV5 643 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 HPCAL4Q9UM19 191 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 GOLGA6L10A0A0M3HER8 536 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 ETFBP38117 255 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 PRKCIP41743 596 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 TBX4P57082 545 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 ST8SIA6P61647 398 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 SLC18A3Q16572 532 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 CLEC16AQ2KHT3 1053 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 KCTD13Q8WZ19 329 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 RPGRIP1Q96KN7 1286 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 WDR27A2RRH5 827 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 TLR5O60602 858 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 EPCAMP16422 314 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 CCR1P32246 355 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 PDCLQ13371 301 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 CELF5Q8N6W0 485 aaKnown RBP9.03□□□□□ -0.96
U2AF1-212ENST00000496462 DEPDC1BQ8WUY9 529 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 CPA5Q8WXQ8 436 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 HAUS1Q96CS2 278 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 ADAM7Q9H2U9 754 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 CLIC5Q9NZA1 410 aa9.03□□□□□ -0.96
U2AF1-212ENST00000496462 HBS1LQ9Y450 684 aaKnown RBP9.03□□□□□ -0.96
U2AF1-212ENST00000496462 MACROD2A1Z1Q3 448 aa9.02□□□□□ -0.97
U2AF1-212ENST00000496462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.02□□□□□ -0.97
U2AF1-212ENST00000496462 F5H5T6 163 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms