RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 RPS9P46781 194 aaKnown RBP21.81■■□□□ 1.08
COL9A2-211ENST00000496215 KCNH2Q12809 1159 aa21.81■■□□□ 1.08
COL9A2-211ENST00000496215 TRIM68Q6AZZ1 485 aa21.81■■□□□ 1.08
COL9A2-211ENST00000496215 TXNDC11Q6PKC3 985 aa21.81■■□□□ 1.08
COL9A2-211ENST00000496215 CNOT6LQ96LI5 555 aaKnown RBP21.81■■□□□ 1.08
COL9A2-211ENST00000496215 EBF3Q9H4W6 596 aa21.81■■□□□ 1.08
COL9A2-211ENST00000496215 HPS4Q9NQG7 708 aa21.81■■□□□ 1.08
COL9A2-211ENST00000496215 SPATA6Q9NWH7 488 aaPredicted RBP21.81■■□□□ 1.08
COL9A2-211ENST00000496215 CPQQ9Y646 472 aa21.81■■□□□ 1.08
COL9A2-211ENST00000496215 FANCMQ8IYD8 2048 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 IFNAR2P48551 515 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 SLC7A9P82251 487 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 RUNX3Q13761 415 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 DPCR1Q3MIW9 517 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 GPRIN1Q7Z2K8 1008 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 C1orf210Q8IVY1 113 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 PPM1KQ8N3J5 372 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 CPA6Q8N4T0 437 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 OSCP1Q8WVF1 389 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 ATP2A3Q93084 1043 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 CHFRQ96EP1 664 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 DUSP16Q9BY84 665 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 DUS2Q9NX74 493 aaKnown RBP21.8■■□□□ 1.08
COL9A2-211ENST00000496215 DACH1Q9UI36 760 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 WNT6Q9Y6F9 365 aa21.8■■□□□ 1.08
COL9A2-211ENST00000496215 OTOL1A6NHN0 477 aaPredicted RBP21.79■■□□□ 1.08
COL9A2-211ENST00000496215 HHLA1C9JL84 531 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 PROB1E7EW31 1015 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 LEFTY2O00292 366 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 MBL2P11226 248 aaPredicted RBP21.79■■□□□ 1.08
COL9A2-211ENST00000496215 ARSAP15289 507 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 TUBP50607 506 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 ZXDBP98169 803 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 LRRC32Q14392 662 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 TPD52L1Q16890 204 aaPredicted RBP21.79■■□□□ 1.08
COL9A2-211ENST00000496215 HECTD3Q5T447 861 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 SNX30Q5VWJ9 437 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 ARHGAP17Q68EM7 881 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 DDX42Q86XP3 938 aaKnown RBP eCLIP21.79■■□□□ 1.08
COL9A2-211ENST00000496215 UBR7Q8N806 425 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 RNF38Q9H0F5 515 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 SMPD4Q9NXE4 827 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 CFAP54Q96N23 3096 aa21.79■■□□□ 1.08
COL9A2-211ENST00000496215 CYP26A1O43174 497 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 ZDHHC11BP0C7U3 371 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 ACO1P21399 889 aaKnown RBP21.78■■□□□ 1.08
COL9A2-211ENST00000496215 SLC8A3P57103 927 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 SGO2Q562F6 1265 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 MED15Q96RN5 788 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 IER2Q9BTL4 223 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 NACA2Q9H009 215 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 INTS2Q9H0H0 1204 aaKnown RBP21.78■■□□□ 1.08
COL9A2-211ENST00000496215 CCSER2Q9H7U1 834 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 TLR8Q9NR97 1041 aaKnown RBP21.78■■□□□ 1.08
COL9A2-211ENST00000496215 CHORDC1Q9UHD1 332 aaPredicted RBP21.78■■□□□ 1.08
COL9A2-211ENST00000496215 SCML2Q9UQR0 700 aa21.78■■□□□ 1.08
COL9A2-211ENST00000496215 COCHO43405 550 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 LAMTOR5O43504 91 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 SP9P0CG40 484 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 CD19P15391 556 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 PON2Q15165 354 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 GOLGA7BQ2TAP0 167 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 ASCL5Q7RTU5 278 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 CREBRFQ8IUR6 639 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 LMO3Q8TAP4 145 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 CHRDQ9H2X0 955 aa21.77■■□□□ 1.08
COL9A2-211ENST00000496215 TLR5O60602 858 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 NFATC1O95644 943 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 CHRNB1P11230 501 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 AMPD2Q01433 879 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 GCNT1Q02742 428 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 MTAPQ13126 283 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 GAS6Q14393 721 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 EML3Q32P44 896 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 TMEM270Q6UE05 265 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 ARHGEF19Q8IW93 802 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 KIAA1958Q8N8K9 716 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 EHBP1Q8NDI1 1231 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 GPT2Q8TD30 523 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 LMAN1LQ9HAT1 526 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 RBM12Q9NTZ6 932 aaKnown RBP21.76■■□□□ 1.07
COL9A2-211ENST00000496215 CFAP97Q9P2B7 532 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 HESX1Q9UBX0 185 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 TSPAN16Q9UKR8 245 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 PCDHB4Q9Y5E5 795 aa21.76■■□□□ 1.07
COL9A2-211ENST00000496215 PAEPP09466 180 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 PGFP49763 221 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 KIF11P52732 1056 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 BCAT1P54687 386 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 RRAGAQ7L523 313 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 TTC30AQ86WT1 665 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 FAM114A1Q8IWE2 563 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 ANKRD52Q8NB46 1076 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 KAT5Q92993 513 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 THAP9Q9H5L6 903 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 ECT2Q9H8V3 914 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 R4GN57 208 aa21.75■■□□□ 1.07
COL9A2-211ENST00000496215 SLC9A3R1O14745 358 aaPredicted RBP21.74■■□□□ 1.07
COL9A2-211ENST00000496215 VDRP11473 427 aa21.74■■□□□ 1.07
COL9A2-211ENST00000496215 ERCC5P28715 1186 aaPredicted RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms