RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.12□□□□□ -0.636e-11■■■■■ 175.8
ERGIC3-219ENST00000496172 GTSE1Q9NYZ3 720 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 ZMIZ1Q9ULJ6 1067 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 CCL26Q9Y258 94 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 ZNF840PA6NDX5 716 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 TADA3O75528 432 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 AP1G2O75843 785 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 YWHAQP27348 245 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 CTHP32929 405 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 SOX9P48436 509 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 MXI1P50539 228 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 MCCD1P59942 119 aaPredicted RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 USP46P62068 366 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 TNK2Q07912 1038 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 IFRD2Q12894 506 aaPredicted RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 TAF10Q12962 218 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 RUNX3Q13761 415 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 SIM2Q14190 667 aaPredicted RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 MTF1Q14872 753 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 DCAF17Q5H9S7 520 aaPredicted RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 DGKKQ5KSL6 1271 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 TCERG1LQ5VWI1 586 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 ISM2Q6H9L7 571 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 PRR23BQ6ZRT6 265 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 ARL14EPQ8N8R7 260 aaPredicted RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 FBXL13Q8NEE6 735 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 FAXDC2Q96IV6 333 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 CYP2S1Q96SQ9 504 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 FAM83CQ9BQN1 747 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 NT5C1AQ9BXI3 368 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 TMEM121BQ9BXQ6 578 aaPredicted RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 KRT82Q9NSB4 513 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 COMMD8Q9NX08 183 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 RAB20Q9NX57 234 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 DUS2Q9NX74 493 aaKnown RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 CHMP5Q9NZZ3 219 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 GCNT4Q9P109 453 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 ARMCX3Q9UH62 379 aaPredicted RBP11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 MAN1B1Q9UKM7 699 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 ITPR1Q14643 2758 aa11.11□□□□□ -0.63
ERGIC3-219ENST00000496172 NBEAQ8NFP9 2946 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 TICRRQ7Z2Z1 1910 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 BICDL2A1A5D9 508 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 C2orf78A6NCI8 922 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 FAM200BP0CF97 657 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 CHRNB1P11230 501 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 CCDC130P13994 396 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 CD58P19256 250 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 ANP32AP39687 249 aaKnown RBP11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 IFNAR2P48551 515 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 CACNA2D1P54289 1103 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 INCA1Q0VD86 236 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 GRSF1Q12849 480 aaKnown RBP eCLIP11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 NR1H3Q13133 447 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 ORC1Q13415 861 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 FUKQ8N0W3 1084 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 CPA6Q8N4T0 437 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 SLC2A14Q8TDB8 520 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 SH3RF2Q8TEC5 729 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 OSCP1Q8WVF1 389 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 OVCA2Q8WZ82 227 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 ATP2A3Q93084 1043 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 FBXO32Q969P5 355 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 CEP63Q96MT8 703 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 KCNK16Q96T55 309 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 FBXO44Q9H4M3 255 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 EBF3Q9H4W6 596 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 APOBEC3GQ9HC16 384 aaKnown RBP11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 METTL14Q9HCE5 456 aaKnown RBP11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 ARHGAP26Q9UNA1 814 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 FLNBO75369 2602 aaKnown RBP11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 LAMA1P25391 3075 aa11.1□□□□□ -0.63
ERGIC3-219ENST00000496172 DMXL2Q8TDJ6 3036 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 ASH1LQ9NR48 2969 aaKnown RBP11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 TRIM49BA6NDI0 452 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 C1QTNF9BB2RNN3 333 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 HRO43593 1189 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 GADD45BO75293 160 aaPredicted RBP11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 C1QTNF9P0C862 333 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 TCF3P15923 654 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 ADORA2BP29275 332 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 HOXA6P31267 233 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 SLC5A3P53794 718 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 PMS1P54277 932 aaKnown RBP11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 MAP3K7CLP57077 242 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 UBE2HP62256 183 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 SLC7A9P82251 487 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 CETN1Q12798 172 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 USP4Q13107 963 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 PON2Q15165 354 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 ZNF77Q15935 545 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 CCDC40Q4G0X9 1142 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 TRIM68Q6AZZ1 485 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 KLHL10Q6JEL2 608 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 PAQR9Q6ZVX9 377 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 FILIP1Q7Z7B0 1213 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 LONP2Q86WA8 852 aa11.09□□□□□ -0.63
ERGIC3-219ENST00000496172 DDX42Q86XP3 938 aaKnown RBP eCLIP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms