RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ANKRD22Q5VYY1 191 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 PMF1Q6P1K2 205 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SCYL2Q6P3W7 929 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 C3orf62Q6ZUJ4 267 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SPATA21Q7Z572 469 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 PLEKHH3Q7Z736 793 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 TMEM110Q86TL2 294 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ACOT1Q86TX2 421 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ZC3H18Q86VM9 953 aaKnown RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 FBXO36Q8NEA4 188 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 OR6B3Q8NGW1 331 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 STK32AQ8WU08 396 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 TEKT4Q8WW24 435 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 BRI3BPQ8WY22 251 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 USP6NLQ92738 828 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 RNF157Q96PX1 679 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 NGRNQ9NPE2 291 aaKnown RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SCN1AP35498 2009 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SMIM35A0A1B0GVV1 85 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 CFAP69A5D8W1 941 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 H7C0C1 242 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 APOL1O14791 398 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 GPR32O75388 356 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ASMTLO95671 621 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 AXLP30530 894 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ATP5OP48047 213 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 GPX6P59796 221 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 TMEM62Q0P6H9 643 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SF3A3Q12874 501 aaKnown RBP eCLIP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ZBTB6Q15916 424 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 TRNP1Q6NT89 227 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 CYP4V2Q6ZWL3 525 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 TTC30AQ86WT1 665 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 FAM172AQ8WUF8 416 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SLC35F5Q8WV83 523 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 PIWIL1Q96J94 861 aaKnown RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ZMAT2Q96NC0 199 aaKnown RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 PAIP2Q9BPZ3 127 aaKnown RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ACSS3Q9H6R3 686 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 FAM49BQ9NUQ9 324 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 CNTN3Q9P232 1028 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 PAK5Q9P286 719 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 RABGEF1Q9UJ41 708 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ZMYND8Q9ULU4 1186 aaPredicted RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 UBQLN1Q9UMX0 589 aaKnown RBP11.56□□□□□ -0.56
CMSS1-208ENST00000496116 SLC12A4Q9UP95 1085 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 ARL2BPQ9Y2Y0 163 aa11.56□□□□□ -0.56
CMSS1-208ENST00000496116 CLUHO75153 1309 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 A8MXQ7 604 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 MDM4O15151 490 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 XPOTO43592 962 aaKnown RBP11.55□□□□□ -0.56
CMSS1-208ENST00000496116 SPAG7O75391 227 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 BANF1O75531 89 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 RASSF9O75901 435 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 TMEM63AO94886 807 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 CD4P01730 458 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 CA4P22748 312 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 SSTR1P30872 391 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 XRCC4Q13426 336 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 MTFR1Q15390 333 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 ZKSCAN8Q15776 578 aaPredicted RBP11.55□□□□□ -0.56
CMSS1-208ENST00000496116 BBS9Q3SYG4 887 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 ZC3H12AQ5D1E8 599 aaKnown RBP11.55□□□□□ -0.56
CMSS1-208ENST00000496116 ARHGAP17Q68EM7 881 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 NPNTQ6UXI9 565 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 SUGP1Q8IWZ8 645 aaKnown RBP11.55□□□□□ -0.56
CMSS1-208ENST00000496116 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
CMSS1-208ENST00000496116 OSMRQ99650 979 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 EIF2AQ9BY44 585 aaKnown RBP11.55□□□□□ -0.56
CMSS1-208ENST00000496116 FRMD8Q9BZ67 464 aaPredicted RBP11.55□□□□□ -0.56
CMSS1-208ENST00000496116 PITPNM3Q9BZ71 974 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 SLC40A1Q9NP59 571 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 SSU72Q9NP77 194 aaKnown RBP11.55□□□□□ -0.56
CMSS1-208ENST00000496116 KLHL14Q9P2G3 628 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
CMSS1-208ENST00000496116 CHADO15335 359 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 SPAG6O75602 509 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 SMIM10L2AP0DMW4 78 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 SMIM10L2BP0DMW5 78 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 CYP2C9P11712 490 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 DARSP14868 501 aaKnown RBP11.54□□□□□ -0.56
CMSS1-208ENST00000496116 TAC1P20366 129 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 MSH2P43246 934 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 BCAR1P56945 870 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 FKBP1BP68106 108 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 GAD2Q05329 585 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 MSS51Q4VC12 460 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 FBXO47Q5MNV8 452 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 C9orf57Q5W0N0 161 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 C1orf228Q6PIY5 440 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 ADGRD1Q6QNK2 874 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 SCUBE3Q8IX30 993 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 TAB3Q8N5C8 712 aaPredicted RBP11.54□□□□□ -0.56
CMSS1-208ENST00000496116 DENND1AQ8TEH3 1009 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 FBF1Q8TES7 1133 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 FAF2Q96CS3 445 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 MRRFQ96E11 262 aaKnown RBP11.54□□□□□ -0.56
CMSS1-208ENST00000496116 ZNF560Q96MR9 790 aa11.54□□□□□ -0.56
CMSS1-208ENST00000496116 TSPAN18Q96SJ8 248 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms