RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 CTC1Q2NKJ3 1217 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 PM20D1Q6GTS8 502 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 XYLT1Q86Y38 959 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 ELMOD1Q8N336 334 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 ACRBPQ8NEB7 543 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 TRMT2BQ96GJ1 504 aaKnown RBP20.49■□□□□ 0.87
ATG3-208ENST00000495756 MYRFLQ96LU7 910 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 ZNF512Q96ME7 567 aaPredicted RBP20.49■□□□□ 0.87
ATG3-208ENST00000495756 DESI2Q9BSY9 194 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 STRIP2Q9ULQ0 834 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 MAGED2Q9UNF1 606 aaPredicted RBP20.49■□□□□ 0.87
ATG3-208ENST00000495756 REXO2Q9Y3B8 237 aaKnown RBP20.49■□□□□ 0.87
ATG3-208ENST00000495756 PCDHA13Q9Y5I0 950 aa20.49■□□□□ 0.87
ATG3-208ENST00000495756 CCDC195A0A1B0GUA6 201 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 FAM92AA1XBS5 289 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 PAPLNO95428 1278 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 POU2F2P09086 479 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 H2AFZP0C0S5 128 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 USP17L7P0C7H9 530 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 ABCB4P21439 1286 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 MAGEA1P43355 309 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 COL19A1Q14993 1142 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 FAM183BPQ6ZVS7 135 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 H2AFVQ71UI9 128 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 ZDHHC17Q8IUH5 632 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 SCML4Q8N228 414 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 C12orf76Q8N812 135 aaPredicted RBP20.48■□□□□ 0.87
ATG3-208ENST00000495756 CMASQ8NFW8 434 aaPredicted RBP20.48■□□□□ 0.87
ATG3-208ENST00000495756 CLEC4CQ8WTT0 213 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 ZNF707Q96C28 371 aaPredicted RBP20.48■□□□□ 0.87
ATG3-208ENST00000495756 TRIM11Q96F44 468 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 PACSIN1Q9BY11 444 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 PRKD2Q9BZL6 878 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 LUC7LQ9NQ29 371 aaKnown RBP20.48■□□□□ 0.87
ATG3-208ENST00000495756 MTMR10Q9NXD2 777 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 SCML2Q9UQR0 700 aa20.48■□□□□ 0.87
ATG3-208ENST00000495756 ZNF638Q14966 1978 aaKnown RBP20.47■□□□□ 0.87
ATG3-208ENST00000495756 NCANO14594 1321 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 ANKRD62A6NC57 917 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 XYLBO75191 536 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 SLC34A2O95436 690 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 MYBL1P10243 752 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 FOSL2P15408 326 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 RRM1P23921 792 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 DAOAP59103 153 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 KRT83P78385 493 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 MRPS5P82675 430 aaKnown RBP20.47■□□□□ 0.87
ATG3-208ENST00000495756 ZNF268Q14587 947 aaPredicted RBP20.47■□□□□ 0.87
ATG3-208ENST00000495756 OR6B2Q6IFH4 312 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 ANKRD54Q6NXT1 300 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 PHLDB2Q86SQ0 1253 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 NDRG1Q92597 394 aaKnown RBP20.47■□□□□ 0.87
ATG3-208ENST00000495756 ZNF653Q96CK0 615 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 THAP2Q9H0W7 228 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 WDR35Q9P2L0 1181 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 ADGRG1Q9Y653 693 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 XIRP2A4UGR9 3374 aa20.47■□□□□ 0.87
ATG3-208ENST00000495756 GSCP56915 257 aaPredicted RBP20.46■□□□□ 0.87
ATG3-208ENST00000495756 SLC6A3Q01959 620 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 TAF10Q12962 218 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 OLFML1Q6UWY5 402 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 TMC5Q6UXY8 1006 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 BHLHA9Q7RTU4 235 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 IRGQQ8WZA9 623 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 FBXO32Q969P5 355 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 MCRS1Q96EZ8 462 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 PIWIL1Q96J94 861 aaKnown RBP20.46■□□□□ 0.87
ATG3-208ENST00000495756 SLITRK1Q96PX8 696 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 CLDND1Q9NY35 253 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 CLEC1BQ9P126 229 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 CNOT8Q9UFF9 292 aaKnown RBP20.46■□□□□ 0.87
ATG3-208ENST00000495756 INTUQ9ULD6 942 aa20.46■□□□□ 0.87
ATG3-208ENST00000495756 YJEFN3A6XGL0 299 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 E7ENQ6 273 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 SART1O43290 800 aaKnown RBP20.45■□□□□ 0.86
ATG3-208ENST00000495756 ATMINO43313 823 aaPredicted RBP20.45■□□□□ 0.86
ATG3-208ENST00000495756 TBX10O75333 385 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 TMEM253P0C7T8 217 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 HOXB8P17481 243 aaPredicted RBP20.45■□□□□ 0.86
ATG3-208ENST00000495756 GPC5P78333 572 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 SYCE2Q6PIF2 218 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 C3orf20Q8ND61 904 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 FEZF2Q8TBJ5 459 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 CTNNBL1Q8WYA6 563 aaPredicted RBP20.45■□□□□ 0.86
ATG3-208ENST00000495756 PABPC5Q96DU9 382 aaKnown RBP20.45■□□□□ 0.86
ATG3-208ENST00000495756 CORO1BQ9BR76 489 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 LRRC3Q9BY71 257 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 ZNF334Q9HCZ1 680 aaPredicted RBP20.45■□□□□ 0.86
ATG3-208ENST00000495756 HCFC1R1Q9NWW0 138 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 GMIPQ9P107 970 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 UXTQ9UBK9 157 aaPredicted RBP20.45■□□□□ 0.86
ATG3-208ENST00000495756 BRWD1Q9NSI6 2320 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 MYO16Q9Y6X6 1858 aa20.45■□□□□ 0.86
ATG3-208ENST00000495756 SPTBN5Q9NRC6 3674 aaKnown RBP20.44■□□□□ 0.86
ATG3-208ENST00000495756 TCRBV5S1A1TA0A578 114 aa20.44■□□□□ 0.86
ATG3-208ENST00000495756 GOLGA8SH3BPF8 625 aa20.44■□□□□ 0.86
ATG3-208ENST00000495756 PTPN2P17706 415 aa20.44■□□□□ 0.86
ATG3-208ENST00000495756 SCNN1AP37088 669 aa20.44■□□□□ 0.86
ATG3-208ENST00000495756 RARS2Q5T160 578 aaKnown RBP20.44■□□□□ 0.86
ATG3-208ENST00000495756 PLEKHA7Q6IQ23 1121 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms