RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 FAM237BA0A1B0GVD1 139 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 H7C0C1 242 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 NDC80O14777 642 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 UGT1A9O60656 530 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 PROZP22891 400 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 ATP5OP48047 213 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 CLCN3P51790 818 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 NEK3P51956 506 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 ZBTB16Q05516 673 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 KCNJ11Q14654 390 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 FAM160B1Q5W0V3 765 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 PPM1NQ8N819 430 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 FAF2Q96CS3 445 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 KLRG1Q96E93 195 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 PTCD3Q96EY7 689 aaKnown RBP13.57□□□□□ -0.24
PTPN7-217ENST00000495688 APOPT1Q96IL0 206 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 ADPGKQ9BRR6 497 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 TLE6Q9H808 572 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 UGT1A7Q9HAW7 530 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 UGT1A10Q9HAW8 530 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 UGT1A8Q9HAW9 530 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 SAR1AQ9NR31 198 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 MED7O43513 233 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 B4GALT4O60513 344 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 SMNDC1O75940 238 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTPN7-217ENST00000495688 C1QAP02745 245 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 MYL2P10916 166 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 GPD2P43304 727 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 NOMO1Q15155 1222 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 CES4AQ5XG92 561 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 MAP1SQ66K74 1059 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-217ENST00000495688 RINLQ6ZS11 566 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 CCDC33Q8N5R6 958 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 ENDOVQ8N8Q3 282 aaKnown RBP13.57□□□□□ -0.24
PTPN7-217ENST00000495688 ZNF398Q8TD17 642 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 ALKBH8Q96BT7 664 aaKnown RBP13.57□□□□□ -0.24
PTPN7-217ENST00000495688 BCO2Q9BYV7 579 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 PHACTR1Q9C0D0 580 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 CDT1Q9H211 546 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 PLAC1Q9HBJ0 212 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 LRRC42Q9Y546 428 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 IQANK1A0A1B0GTG1 560 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 TRIM49D1C9J1S8 452 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 GPR25O00155 361 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 KCNN4O15554 427 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 PDHA1P08559 390 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 CPA2P48052 419 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 BMPR2Q13873 1038 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 TSHZ1Q6ZSZ6 1077 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 ALYREFQ86V81 257 aaKnown RBP13.57□□□□□ -0.24
PTPN7-217ENST00000495688 NCAPG2Q86XI2 1143 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 SKA1Q96BD8 255 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 MCRS1Q96EZ8 462 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 BTBD10Q9BSF8 475 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 FRMD8P1Q9BZ68 369 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-217ENST00000495688 RSAD1Q9HA92 442 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 USP29Q9HBJ7 922 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 PIM2Q9P1W9 311 aa13.57□□□□□ -0.24
PTPN7-217ENST00000495688 CYB561D2O14569 222 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 GSC2O15499 205 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 PGK2P07205 417 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 CYP3A5P20815 502 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 SERPINB4P48594 390 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 ERFP50548 548 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 YWHAZP63104 245 aaKnown RBP13.56□□□□□ -0.24
PTPN7-217ENST00000495688 BLMHQ13867 455 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 MXD4Q14582 209 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-217ENST00000495688 KPNB1Q14974 876 aaKnown RBP13.56□□□□□ -0.24
PTPN7-217ENST00000495688 WASHC2DQ5SRD0 308 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 JADE1Q6IE81 842 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 SCYL2Q6P3W7 929 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 RFX8Q6ZV50 586 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 C12orf29Q8N999 325 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 WDR60Q8WVS4 1066 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 RXFP2Q8WXD0 754 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 HEXIM2Q96MH2 286 aaKnown RBP13.56□□□□□ -0.24
PTPN7-217ENST00000495688 SRPK1Q96SB4 655 aaKnown RBP13.56□□□□□ -0.24
PTPN7-217ENST00000495688 SLC13A1Q9BZW2 595 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 SMYD2Q9NRG4 433 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 TAS2R1Q9NYW7 299 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 CNTN3Q9P232 1028 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTPN7-217ENST00000495688 CCDC195A0A1B0GUA6 201 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 ACKR2O00590 384 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 GYG2O15488 501 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 CCDC22O60826 627 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 CILPO75339 1184 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 TOP3BO95985 862 aaKnown RBP13.56□□□□□ -0.24
PTPN7-217ENST00000495688 APRTP07741 180 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 PDGFRAP16234 1089 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 RBL1P28749 1068 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 RGS7P49802 495 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 CDK16Q00536 496 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 SLC18A2Q05940 514 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 SURF1Q15526 300 aa13.56□□□□□ -0.24
PTPN7-217ENST00000495688 ACSBG2Q5FVE4 666 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms