RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 SUSD2Q9UGT4 822 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
COL1A1-209ENST00000495677 SETXQ7Z333 2677 aaKnown RBP14.35□□□□□ -0.11
COL1A1-209ENST00000495677 TMEM131Q92545 1883 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 A0A1W2PQF6 199 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 TBC1D3BA6NDS4 549 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 HOXC11O43248 304 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-209ENST00000495677 CBFA2T3O75081 653 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 ATP2C2O75185 946 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 TBCAO75347 108 aaKnown RBP14.34□□□□□ -0.11
COL1A1-209ENST00000495677 SEC24BO95487 1268 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 PLCG1P19174 1290 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 GARTP22102 1010 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 LMO2P25791 158 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 ANXA13P27216 316 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 NTSR1P30989 418 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 DDIT3P35638 169 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 UBA7P41226 1012 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 MCM6Q14566 821 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 LY6G5CQ5SRR4 150 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 SCARA3Q6AZY7 606 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 TOGARAM2Q6ZUX3 1019 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 KBTBD7Q8WVZ9 684 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 BBC3Q96PG8 261 aaPredicted RBP14.34□□□□□ -0.11
COL1A1-209ENST00000495677 SYT15Q9BQS2 421 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 CRTAC1Q9NQ79 661 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 CALCOCO1Q9P1Z2 691 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 SIX4Q9UIU6 781 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 HCN2Q9UL51 889 aa14.34□□□□□ -0.11
COL1A1-209ENST00000495677 HELZ2Q9BYK8 2649 aaKnown RBP14.34□□□□□ -0.11
COL1A1-209ENST00000495677 BPTFQ12830 3046 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 HCRTO43612 131 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 TULP3O75386 442 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 KRT18P05783 430 aaKnown RBP14.33□□□□□ -0.12
COL1A1-209ENST00000495677 ZNF883P0CG24 379 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 GNSP15586 552 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 MYO1EQ12965 1108 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 DHX8Q14562 1220 aaKnown RBP14.33□□□□□ -0.12
COL1A1-209ENST00000495677 PLEKHG6Q3KR16 790 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 SYCP2LQ5T4T6 812 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 DBX2Q6ZNG2 339 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 TMPRSS7Q7RTY8 843 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 NAXDQ8IW45 347 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 DEFB119Q8N690 84 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.12
COL1A1-209ENST00000495677 TRIML1Q8N9V2 468 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 TERB1Q8NA31 727 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 GLIS3Q8NEA6 775 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 OR2I1PQ8NGU4 316 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 MYCBPAPQ8TBZ2 947 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 DNASE2BQ8WZ79 361 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 OVCA2Q8WZ82 227 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 LARP4BQ92615 738 aaKnown RBP14.33□□□□□ -0.12
COL1A1-209ENST00000495677 FOXJ1Q92949 421 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 MYLPFQ96A32 169 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 PCED1BQ96HM7 432 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 FAM213AQ9BRX8 229 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 ZHX3Q9H4I2 956 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 ZDHHC4Q9NPG8 344 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 CACNA2D2Q9NY47 1150 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 CFAP97Q9P2B7 532 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 DEC1Q9P2X7 70 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 SEL1LQ9UBV2 794 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 EXOC7Q9UPT5 735 aa14.33□□□□□ -0.12
COL1A1-209ENST00000495677 CKAP5Q14008 2032 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 ZBTB24O43167 697 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-209ENST00000495677 DKK1O94907 266 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 HOXB2P14652 356 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
COL1A1-209ENST00000495677 TAF10Q12962 218 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 SNX30Q5VWJ9 437 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 TDRD10Q5VZ19 366 aaKnown RBP14.32□□□□□ -0.12
COL1A1-209ENST00000495677 BTBD8Q5XKL5 378 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
COL1A1-209ENST00000495677 SLCO6A1Q86UG4 719 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 PNPLA1Q8N8W4 532 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 MDM1Q8TC05 714 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 HNRNPLLQ8WVV9 542 aaKnown RBP14.32□□□□□ -0.12
COL1A1-209ENST00000495677 ZFRQ96KR1 1074 aaKnown RBP14.32□□□□□ -0.12
COL1A1-209ENST00000495677 HSPA12BQ96MM6 686 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 SLITRK1Q96PX8 696 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 IKZF4Q9H2S9 585 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 RBAKQ9NYW8 714 aaPredicted RBP14.32□□□□□ -0.12
COL1A1-209ENST00000495677 PCOLCE2Q9UKZ9 415 aa14.32□□□□□ -0.12
COL1A1-209ENST00000495677 F8VP50 259 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 GFRA2O00451 464 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 KRT19P08727 400 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 MBL2P11226 248 aaPredicted RBP14.31□□□□□ -0.12
COL1A1-209ENST00000495677 NDUFV2P19404 249 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 LONP1P36776 959 aaKnown RBP14.31□□□□□ -0.12
COL1A1-209ENST00000495677 KDSRQ06136 332 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 WDR45BQ5MNZ6 344 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 L1TD1Q5T7N2 865 aaKnown RBP14.31□□□□□ -0.12
COL1A1-209ENST00000495677 SDE2Q6IQ49 451 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 SCUBE3Q8IX30 993 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 RGL4Q8IZJ4 473 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 ZSWIM2Q8NEG5 633 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 PDZD8Q8NEN9 1154 aa14.31□□□□□ -0.12
COL1A1-209ENST00000495677 IPO4Q8TEX9 1081 aaKnown RBP14.31□□□□□ -0.12
COL1A1-209ENST00000495677 ACCSQ96QU6 501 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms