RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.59	□□□□□ -0.55
DCTN1-223	ENST00000495643	GPRIN1	Q7Z2K8	1008 aa		11.59	□□□□□ -0.55
DCTN1-223	ENST00000495643	UBR7	Q8N806	425 aa		11.59	□□□□□ -0.55
DCTN1-223	ENST00000495643	OSCP1	Q8WVF1	389 aa		11.59	□□□□□ -0.55
DCTN1-223	ENST00000495643	DUS2	Q9NX74	493 aa	Known RBP	11.59	□□□□□ -0.55
DCTN1-223	ENST00000495643	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.59	□□□□□ -0.55
DCTN1-223	ENST00000495643	COCH	O43405	550 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	LAMTOR5	O43504	91 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	CUL2	Q13617	745 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	CCIN	Q13939	588 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	GAS6	Q14393	721 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	DGKK	Q5KSL6	1271 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	TRIM59	Q8IWR1	403 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	KIAA1958	Q8N8K9	716 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	LMO3	Q8TAP4	145 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	NELL1	Q92832	810 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	TMEM176A	Q96HP8	235 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	ZFR	Q96KR1	1074 aa	Known RBP	11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	HEXIM2	Q96MH2	286 aa	Known RBP	11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	MED15	Q96RN5	788 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	IER2	Q9BTL4	223 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	SRRT	Q9BXP5	876 aa	Known RBP	11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	DUSP16	Q9BY84	665 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	DNAI2	Q9GZS0	605 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	LINC00597	Q9H2U6	94 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	CLSTN2	Q9H4D0	955 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	FBXO44	Q9H4M3	255 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	ECT2	Q9H8V3	914 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	PNPLA8	Q9NP80	782 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	PRMT8	Q9NR22	394 aa	Predicted RBP	11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	RBM12	Q9NTZ6	932 aa	Known RBP	11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	GMIP	Q9P107	970 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	WNT6	Q9Y6F9	365 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	ZNF292	O60281	2723 aa		11.58	□□□□□ -0.56
DCTN1-223	ENST00000495643	PRR23A	A6NEV1	266 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	TRDMT1	O14717	391 aa	Known RBP	11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	P4HA2	O15460	535 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	GNA14	O95837	355 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	TDGF1	P13385	188 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	GJA4	P35212	333 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	IFNAR2	P48551	515 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	TUB	P50607	506 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	KIF11	P52732	1056 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	CSTF1	Q05048	431 aa	Known RBP	11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	LRRC32	Q14392	662 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	TMEM196	Q5HYL7	178 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	HECTD3	Q5T447	861 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	ARHGAP17	Q68EM7	881 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	ASCL5	Q7RTU5	278 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	CPA6	Q8N4T0	437 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	TTC16	Q8NEE8	873 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	ATP2A3	Q93084	1043 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	CCSER2	Q9H7U1	834 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	SMPD4	Q9NXE4	827 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	RWDD2A	Q9UIY3	292 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	SCML2	Q9UQR0	700 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	CPQ	Q9Y646	472 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643		R4GN57	208 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	KIAA1549L	Q6ZVL6	1849 aa		11.57	□□□□□ -0.56
DCTN1-223	ENST00000495643	CYP26A1	O43174	497 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	GFRA3	O60609	400 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	MBL2	P11226	248 aa	Predicted RBP	11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	ACO1	P21399	889 aa	Known RBP	11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	TBXAS1	P24557	533 aa	Predicted RBP	11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	GALK1	P51570	392 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	KCNH2	Q12809	1159 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	LRMP	Q12912	555 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	NAIF1	Q69YI7	327 aa	Predicted RBP	11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	FSTL4	Q6MZW2	842 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643		Q6ZS52	159 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	ADGRG2	Q8IZP9	1017 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	SYNPO	Q8N3V7	929 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	SPEM1	Q8N4L4	309 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	MLKL	Q8NB16	471 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	ANKRD52	Q8NB46	1076 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	EHBP1	Q8NDI1	1231 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	NKD2	Q969F2	451 aa	Predicted RBP	11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	JAKMIP2	Q96AA8	810 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	UBXN6	Q9BZV1	441 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	SEMA4A	Q9H3S1	761 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	TLR8	Q9NR97	1041 aa	Known RBP	11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	LMBRD1	Q9NUN5	540 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	OSER1	Q9NX31	292 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	CFAP97	Q9P2B7	532 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	USP3	Q9Y6I4	520 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	MYOF	Q9NZM1	2061 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	CFAP54	Q96N23	3096 aa		11.56	□□□□□ -0.56
DCTN1-223	ENST00000495643	E2F8	A0AVK6	867 aa		11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	TLR5	O60602	858 aa		11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	FGFR1OP	O95684	399 aa	Known RBP	11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	AFP	P02771	609 aa	Known RBP	11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	CCDC192	P0DO97	292 aa		11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	YWHAE	P62258	255 aa	Known RBP	11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	AMPD2	Q01433	879 aa		11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	SATB1	Q01826	763 aa		11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	NR1H3	Q13133	447 aa		11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	GAB4	Q2WGN9	574 aa		11.55	□□□□□ -0.56
DCTN1-223	ENST00000495643	SGO2	Q562F6	1265 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms