RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 C2orf15Q8WU43 125 aaKnown RBP16.49■□□□□ 0.23
PHF1-211ENST00000495509 ARNTL2Q8WYA1 636 aa16.49■□□□□ 0.23
PHF1-211ENST00000495509 C8orf48Q96LL4 319 aa16.49■□□□□ 0.23
PHF1-211ENST00000495509 PRO3102Q9H379 93 aa16.49■□□□□ 0.23
PHF1-211ENST00000495509 TMEM59LQ9UK28 342 aa16.49■□□□□ 0.23
PHF1-211ENST00000495509 SSX2IPQ9Y2D8 614 aa16.49■□□□□ 0.23
PHF1-211ENST00000495509 ZNF638Q14966 1978 aaKnown RBP16.48■□□□□ 0.23
PHF1-211ENST00000495509 GREB1Q4ZG55 1949 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 PATJQ8NI35 1801 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 EPOPA6NHQ4 379 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 ENC1O14682 589 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 SLC5A3P53794 718 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 USP46P62068 366 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
PHF1-211ENST00000495509 UBE3AQ05086 875 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 ZNF252P-AS1Q0IIN9 211 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 IFRD2Q12894 506 aaPredicted RBP16.48■□□□□ 0.23
PHF1-211ENST00000495509 RAB30Q15771 203 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 TPGS2Q68CL5 300 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 HFE2Q6ZVN8 426 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 DAAM2Q86T65 1068 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 SIX6OS1Q8N1H7 587 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 TRIM58Q8NG06 486 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 GIPC2Q8TF65 315 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 ZNF592Q92610 1267 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 SAMD11Q96NU1 681 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 CYP4F11Q9HBI6 524 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 PNPLA8Q9NP80 782 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 IRAK3Q9Y616 596 aa16.48■□□□□ 0.23
PHF1-211ENST00000495509 YJEFN3A6XGL0 299 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 E7ENQ6 273 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 FSCN2O14926 492 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 TRIM66O15016 1216 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 TGM5O43548 720 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 ZBED1O96006 694 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 ATF6P18850 670 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 MTMR3Q13615 1198 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 SMC1AQ14683 1233 aaKnown RBP16.47■□□□□ 0.23
PHF1-211ENST00000495509 IFI16Q16666 785 aaKnown RBP16.47■□□□□ 0.23
PHF1-211ENST00000495509 DAB2IPQ5VWQ8 1189 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 SLFN11Q7Z7L1 901 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 SLC28A3Q9HAS3 691 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 PACSIN2Q9UNF0 486 aaPredicted RBP16.47■□□□□ 0.23
PHF1-211ENST00000495509 ALG6Q9Y672 507 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 USP3Q9Y6I4 520 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 PLXNA3P51805 1871 aa16.47■□□□□ 0.23
PHF1-211ENST00000495509 MYO1FO00160 1098 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 NCK2O43639 380 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 KLRC2P26717 231 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 FLT3P36888 993 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 PGFP49763 221 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 DAOAP59103 153 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 PM20D1Q6GTS8 502 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 LILRA6Q6PI73 481 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 SLC26A9Q7LBE3 791 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 BHLHA9Q7RTU4 235 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 ZDHHC17Q8IUH5 632 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 ALS2CR12Q96Q35 445 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 NGRNQ9NPE2 291 aaKnown RBP16.46■□□□□ 0.23
PHF1-211ENST00000495509 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
PHF1-211ENST00000495509 RFXAPO00287 272 aa16.46■□□□□ 0.22
PHF1-211ENST00000495509 TUFMP49411 452 aaKnown RBP16.46■□□□□ 0.22
PHF1-211ENST00000495509 CREMQ03060 361 aa16.46■□□□□ 0.22
PHF1-211ENST00000495509 NUP93Q8N1F7 819 aa16.46■□□□□ 0.22
PHF1-211ENST00000495509 GDPD5Q8WTR4 605 aa16.46■□□□□ 0.22
PHF1-211ENST00000495509 RXFP2Q8WXD0 754 aa16.46■□□□□ 0.22
PHF1-211ENST00000495509 FAM149B1Q96BN6 582 aa16.46■□□□□ 0.22
PHF1-211ENST00000495509 CNGB3Q9NQW8 809 aa16.46■□□□□ 0.22
PHF1-211ENST00000495509 C2CD4BA6NLJ0 364 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 FBXO21O94952 628 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 ATP1A1P05023 1023 aaKnown RBP16.45■□□□□ 0.22
PHF1-211ENST00000495509 PDGFRAP16234 1089 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 COMTP21964 271 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 CASQ1P31415 396 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 ELF1P32519 619 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 RPL10AP62906 217 aaKnown RBP16.45■□□□□ 0.22
PHF1-211ENST00000495509 RAB6CQ53S08 254 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 EFHC1Q5JVL4 640 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 DNTTIP2Q5QJE6 756 aaKnown RBP16.45■□□□□ 0.22
PHF1-211ENST00000495509 SH3PXD2AQ5TCZ1 1133 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 NT5DC3Q86UY8 548 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 SPATA17Q96L03 361 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 EMILIN2Q9BXX0 1053 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 RAB6CQ9H0N0 254 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 ATG2AQ2TAZ0 1938 aa16.45■□□□□ 0.22
PHF1-211ENST00000495509 PRRG1O14668 218 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 PER2O15055 1255 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 PROSCO94903 275 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 FYNP06241 537 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 ADH1AP07327 375 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 TFE3P19532 575 aaPredicted RBP16.44■□□□□ 0.22
PHF1-211ENST00000495509 YWHAZP63104 245 aaKnown RBP16.44■□□□□ 0.22
PHF1-211ENST00000495509 C11orf63Q6NUN7 778 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 DENND5BQ6ZUT9 1274 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 TCEAL8Q8IYN2 117 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 ARFGAP1Q8N6T3 406 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 TIFAQ96CG3 184 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 CFAP57Q96MR6 1250 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 TLR10Q9BXR5 811 aa16.44■□□□□ 0.22
PHF1-211ENST00000495509 ADAM33Q9BZ11 813 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms