RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 PTPRN2Q92932 1015 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 FAF2Q96CS3 445 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 SERAC1Q96JX3 654 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 GPR20Q99678 358 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 BTBD10Q9BSF8 475 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 ELOVL4Q9GZR5 314 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 SDCBP2Q9H190 292 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 CDT1Q9H211 546 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 DCLRE1BQ9H816 532 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 VRTNQ9H8Y1 702 aa15.51■□□□□ 0.07
UBXN11-215ENST00000494942 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.51■□□□□ 0.07
UBXN11-215ENST00000494942 CFAP69A5D8W1 941 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 NOP56O00567 594 aaKnown RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 GM2AP17900 193 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 HIRAP54198 1017 aaPredicted RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 CDK16Q00536 496 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 FAAP100Q0VG06 881 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 LGSNQ5TDP6 509 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 TTC39BQ5VTQ0 682 aaPredicted RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 ZC3H18Q86VM9 953 aaKnown RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 LRRC6Q86X45 466 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.5■□□□□ 0.073e-7■■□□□ 14.5
UBXN11-215ENST00000494942 CEP120Q8N960 986 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 NSL1Q96IY1 281 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 NLRP4Q96MN2 994 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 FAM124BQ9H5Z6 455 aaPredicted RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 DENND2DQ9H6A0 471 aaPredicted RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 H7C0C1 242 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 ATP5OP48047 213 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 SLC26A2P50443 739 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 MTM1Q13496 603 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 KRT72Q14CN4 511 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 PDK2Q15119 407 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 EEF1DP3Q658K8 133 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 TRIM42Q8IWZ5 723 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 SKA1Q96BD8 255 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 RTP4Q96DX8 246 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 PTCD3Q96EY7 689 aaKnown RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 RNF157Q96PX1 679 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 FAM111AQ96PZ2 611 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 TWNKQ96RR1 684 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 PEBP4Q96S96 227 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 IQCGQ9H095 443 aaKnown RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 C12orf65Q9H3J6 166 aaKnown RBP15.5■□□□□ 0.07
UBXN11-215ENST00000494942 SMYD3Q9H7B4 428 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 CNTN3Q9P232 1028 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 ZNF180Q9UJW8 692 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 PPP2R3BQ9Y5P8 575 aa15.5■□□□□ 0.07
UBXN11-215ENST00000494942 C2CD4BA6NLJ0 364 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 TRDMT1O14717 391 aaKnown RBP15.49■□□□□ 0.07
UBXN11-215ENST00000494942 B4GALT5O43286 388 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 PRPSAP2O60256 369 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 KRT37O76014 449 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 ITGB3P05106 788 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 NFICP08651 508 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 DLDP09622 509 aaKnown RBP15.49■□□□□ 0.07
UBXN11-215ENST00000494942 PYGBP11216 843 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 ZBTB16Q05516 673 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 MBTD1Q05BQ5 628 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 MMRN1Q13201 1228 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 NPNTQ6UXI9 565 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 TTC39CQ8N584 583 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 KCNV2Q8TDN2 545 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 TTC17Q96AE7 1141 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 HEXIM2Q96MH2 286 aaKnown RBP15.49■□□□□ 0.07
UBXN11-215ENST00000494942 TMEM120AQ9BXJ8 343 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 NFKBIZQ9BYH8 718 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 KCNK13Q9HB14 408 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 BTBD7Q9P203 1132 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 KIAA1257Q9ULG3 409 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 WDR90Q96KV7 1748 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 COPEO14579 308 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 GSTA2P09210 222 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 PDGFRAP16234 1089 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 TGM2P21980 687 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 SERPINB4P48594 390 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 TNFAIP2Q03169 654 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 ORC1Q13415 861 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 BLMHQ13867 455 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 BOLA3Q53S33 107 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 CELF3Q5SZQ8 465 aaKnown RBP15.49■□□□□ 0.07
UBXN11-215ENST00000494942 C4orf50Q6ZRC1 276 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 NCAPG2Q86XI2 1143 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 KIRREL3Q8IZU9 778 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 CADM1Q9BY67 442 aaKnown RBP15.49■□□□□ 0.07
UBXN11-215ENST00000494942 TRIM6Q9C030 488 aaPredicted RBP15.49■□□□□ 0.07
UBXN11-215ENST00000494942 ASB7Q9H672 318 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 USP29Q9HBJ7 922 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 ALG13Q9NP73 1137 aaKnown RBP15.49■□□□□ 0.07
UBXN11-215ENST00000494942 RAB6BQ9NRW1 208 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 PRMT7Q9NVM4 692 aaPredicted RBP15.49■□□□□ 0.07
UBXN11-215ENST00000494942 HMGXB4Q9UGU5 601 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 NUMBLQ9Y6R0 609 aa15.49■□□□□ 0.07
UBXN11-215ENST00000494942 LACTBL1A8MY62 500 aa15.48■□□□□ 0.07
UBXN11-215ENST00000494942 SNRPAP09012 282 aaKnown RBP15.48■□□□□ 0.07
UBXN11-215ENST00000494942 KRT81Q14533 505 aa15.48■□□□□ 0.07
UBXN11-215ENST00000494942 HSDL1Q3SXM5 330 aa15.48■□□□□ 0.07
UBXN11-215ENST00000494942 FAM91A1Q658Y4 838 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms