RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 ANKRD20A8PQ5CZ79 823 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 C3orf58Q8NDZ4 430 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 RAPGEF5Q92565 580 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 UROC1Q96N76 676 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 SUFUQ9UMX1 484 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 NOVA2Q9UNW9 492 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 CASTOR2A6NHX0 329 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 DNM1LO00429 736 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 DPYSL4O14531 572 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 PAPSS1O43252 624 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 TJP3O95049 919 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 ECEL1O95672 775 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 EOMESO95936 686 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 PDGFRAP16234 1089 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 PTPN1P18031 435 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 SLC8A3P57103 927 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 TUSC3Q13454 348 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 CCNG2Q16589 344 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 PREPLQ4J6C6 727 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 TXNRD3NBQ6F5E7 133 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 DSTYKQ6XUX3 929 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 SPOCD1Q6ZMY3 1216 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 CACNA2D3Q8IZS8 1091 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 C1orf54Q8WWF1 131 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 PIWIL1Q96J94 861 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 HEMGNQ9BXL5 484 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 DCLK3Q9C098 648 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 CACNG4Q9UBN1 327 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 EFR3BQ9Y2G0 817 aa19.39■□□□□ 0.69
TSPAN4-212ENST00000494815 BRCA2P51587 3418 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 C9IYK1 514 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 PIK3R2O00459 728 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 POMCP01189 267 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 BYSLQ13895 437 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 TFDP3Q5H9I0 405 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 MFSD7Q6UXD7 560 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 SYDE1Q6ZW31 735 aaPredicted RBP19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 SLC24A5Q71RS6 500 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 ARCQ7LC44 396 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 FUKQ8N0W3 1084 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 GRK7Q8WTQ7 553 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 RXFP2Q8WXD0 754 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 P3H4Q92791 437 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 KLHL11Q9NVR0 708 aa19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 DDX43Q9NXZ2 648 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-212ENST00000494815 LRRD1A4D1F6 860 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 PI4K2BG5E9Z4 385 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 XPO1O14980 1071 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 GABBR2O75899 941 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 IGFBP6P24592 240 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 CDK7P50613 346 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 LACTB2Q53H82 288 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 ANKS1BQ7Z6G8 1248 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 SCUBE3Q8IX30 993 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 SH3TC2Q8TF17 1288 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 FTHL17Q9BXU8 183 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 DUSP16Q9BY84 665 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 DPH5Q9H2P9 285 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 CHST7Q9NS84 486 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 CEP350Q5VT06 3117 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 hCG_1818297A0A087WSY0 165 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 DESP17661 470 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 IL1R2P27930 398 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 TKTP29401 623 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 MIPP30301 263 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 CDKN2BP42772 138 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 MAGOHP61326 146 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 PLCB3Q01970 1234 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 SPRED3Q2MJR0 410 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 SPDYCQ5MJ68 293 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 TRNP1Q6NT89 227 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 SLC26A9Q7LBE3 791 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 PAAF1Q9BRP4 392 aa19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 CNOT10Q9H9A5 744 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-212ENST00000494815 ODC1P11926 461 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 SELPP16109 830 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 FAM189BP81408 668 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 SNCBQ16143 134 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 KRT71Q3SY84 523 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 WLSQ5T9L3 541 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 GKAP1Q5VSY0 366 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 CYB5D1Q6P9G0 228 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 FAM43BQ6ZT52 329 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 LRRC8DQ7L1W4 858 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 TAX1BP1Q86VP1 789 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 PARP9Q8IXQ6 854 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 ATG4AQ8WYN0 398 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 KHSRPQ92945 711 aaKnown RBP eCLIP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 FAM129AQ9BZQ8 928 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 TRIM31Q9BZY9 425 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 UNC93B1Q9H1C4 597 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 ZWILCHQ9H900 591 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 PAK6Q9NQU5 681 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 USP18Q9UMW8 372 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 INPP5FQ9Y2H2 1132 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 C3orf70A6NLC5 250 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 ATP2C2O75185 946 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 B3GAT3O94766 335 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 NPR3P17342 541 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 ACAT1P24752 427 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms