RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SPAG6O75602 509 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 ZBTB11O95625 1053 aaPredicted RBP4.99□□□□□ -1.61
PRKD3-210ENST00000494667 CPNE6O95741 557 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 BAG2O95816 211 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 UGT2B4P06133 528 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 TNFAIP3P21580 790 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 NR2F2P24468 414 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 EIF2B2P49770 351 aaKnown RBP4.99□□□□□ -1.61
PRKD3-210ENST00000494667 SLC12A3P55017 1021 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 TMBIM6P55061 237 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF200P98182 395 aaPredicted RBP4.99□□□□□ -1.61
PRKD3-210ENST00000494667 IFITM2Q01629 132 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 ARID5AQ03989 594 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 ZBTB16Q05516 673 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 DRAP1Q14919 205 aaPredicted RBP4.99□□□□□ -1.61
PRKD3-210ENST00000494667 METTL24Q5JXM2 366 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 KRT79Q5XKE5 535 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 ANKRD26P1Q6NSI1 321 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 MAMDC4Q6UXC1 1216 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 VASH1Q7L8A9 365 aaPredicted RBP4.99□□□□□ -1.61
PRKD3-210ENST00000494667 PCGF5Q86SE9 256 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 KATNAL2Q8IYT4 538 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 TTC30BQ8N4P2 665 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 TNIP2Q8NFZ5 429 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 NEDD1Q8NHV4 660 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 PNPT1Q8TCS8 783 aaKnown RBP4.99□□□□□ -1.61
PRKD3-210ENST00000494667 AFG1LQ8WV93 481 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 RASSF5Q8WWW0 418 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 DPF3Q92784 378 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 RPGRQ92834 1020 aaKnown RBP4.99□□□□□ -1.61
PRKD3-210ENST00000494667 MARVELD3Q96A59 401 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 C12orf43Q96C57 262 aaKnown RBP4.99□□□□□ -1.61
PRKD3-210ENST00000494667 CLIP3Q96DZ5 547 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 SLC13A1Q9BZW2 595 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 MYRFQ9Y2G1 1151 aa4.99□□□□□ -1.61
PRKD3-210ENST00000494667 GREB1LQ9C091 1923 aaPredicted RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 PTPRFP10586 1907 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 A0A1W2PPM1 405 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 GOLGA8CPA6NN73 597 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 MCF2LO15068 1137 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 UFL1O94874 794 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CHRNB1P11230 501 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 PLS3P13797 630 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 JAK1P23458 1154 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ADSLP30566 484 aaPredicted RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 GPX6P59796 221 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CTBSQ01459 385 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 TUBA3CQ13748 450 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FAXCQ5TGI0 409 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FAAH2Q6GMR7 532 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 MOXD1Q6UVY6 613 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CLEC4GQ6UXB4 293 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 KCNK18Q7Z418 384 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF598Q86UK7 904 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ALYREFQ86V81 257 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 PALB2Q86YC2 1186 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 LACC1Q8IV20 430 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 MFSD2AQ8NA29 543 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 HCAR2Q8TDS4 363 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 PYDC1Q8WXC3 89 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 TP53INP1Q96A56 240 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 SDCCAG3Q96C92 435 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CMTM5Q96DZ9 223 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FEM1CQ96JP0 617 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CNDP1Q96KN2 507 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 C1orf50Q9BV19 199 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CHST7Q9NS84 486 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 BMP2KQ9NSY1 1161 aaPredicted RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 TRNAU1APQ9NX07 287 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 GNEQ9Y223 722 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CPQQ9Y646 472 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ARID2Q68CP9 1835 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ROBO1Q9Y6N7 1651 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 DENND3A2RUS2 1198 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 DYNC1LI2O43237 492 aaPredicted RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 MARCH6O60337 910 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 AKAP3O75969 853 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 C1QAP02745 245 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 P4HA1P13674 534 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ITGAXP20702 1163 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 TGM1P22735 817 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 TECP42680 631 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CLK2P49760 499 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 COPAP53621 1224 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 HIRAP54198 1017 aaPredicted RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 HERC3Q15034 1050 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CALCRLQ16602 461 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 SCARA3Q6AZY7 606 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 PRPF39Q86UA1 669 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 DZIP1Q86YF9 867 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 DCP2Q8IU60 420 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 ACMSDQ8TDX5 336 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 RAPGEF4Q8WZA2 1011 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 HSPH1Q92598 858 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CELF1Q92879 486 aaKnown RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 NKD2Q969F2 451 aaPredicted RBP4.98□□□□□ -1.61
PRKD3-210ENST00000494667 VMP1Q96GC9 406 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 CLPTM1LQ96KA5 538 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 FBXL18Q96ME1 805 aa4.98□□□□□ -1.61
PRKD3-210ENST00000494667 GCNAQ96QF7 691 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms