RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SLC7A9P82251 487 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 MRPS21P82921 87 aaKnown RBP10.24□□□□□ -0.77
UBR4-216ENST00000494503 ZXDBP98169 803 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 SLC39A14Q15043 492 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 FAM26FQ5R3K3 315 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 LY6G5CQ5SRR4 150 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 EMC10Q5UCC4 262 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 LYSMD4Q5XG99 296 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 UNQ6494/PRO21346Q6UXR6 183 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 TMEM92Q6UXU6 159 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 C12orf40Q86WS4 652 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 NUP93Q8N1F7 819 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 DEFB119Q8N690 84 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 B3GALNT2Q8NCR0 500 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 DEFB124Q8NES8 71 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 C8orf48Q96LL4 319 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 CGRRF1Q99675 332 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 AGPAT3Q9NRZ7 376 aa10.24□□□□□ -0.77
UBR4-216ENST00000494503 CHORDC1Q9UHD1 332 aaPredicted RBP10.24□□□□□ -0.77
UBR4-216ENST00000494503 FRYQ5TBA9 3013 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 CACNA1EQ15878 2313 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 SPTLC2O15270 562 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 EIF3DO15371 548 aaKnown RBP eCLIP10.23□□□□□ -0.77
UBR4-216ENST00000494503 EXOC3O60645 756 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 RTN3O95197 1032 aaPredicted RBP10.23□□□□□ -0.77
UBR4-216ENST00000494503 CST3P01034 146 aaPredicted RBP10.23□□□□□ -0.77
UBR4-216ENST00000494503 TCF3P15923 654 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 GRIA2P42262 883 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 MYL6P60660 151 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 SHC2P98077 582 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 RPL6Q02878 288 aaKnown RBP10.23□□□□□ -0.77
UBR4-216ENST00000494503 GAD2Q05329 585 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 CYP24A1Q07973 514 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 LMAN2Q12907 356 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 BYSLQ13895 437 aaKnown RBP10.23□□□□□ -0.77
UBR4-216ENST00000494503 ZNF699Q32M78 642 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 C10orf76Q5T2E6 689 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 NUDT18Q6ZVK8 323 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 RASSF3Q86WH2 238 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 ADGRG2Q8IZP9 1017 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 FRMD1Q8N878 549 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
UBR4-216ENST00000494503 IL17RCQ8NAC3 791 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 XXYLT1Q8NBI6 393 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 PDZD8Q8NEN9 1154 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 SYAP1Q96A49 352 aaPredicted RBP10.23□□□□□ -0.77
UBR4-216ENST00000494503 JAKMIP2Q96AA8 810 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 ELMO3Q96BJ8 720 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 CEP295NLQ96MC4 621 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 TRIM9Q9C026 710 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 BLZF1Q9H2G9 400 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 SLC32A1Q9H598 525 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 SMYD3Q9H7B4 428 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 KRT82Q9NSB4 513 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 TBC1D14Q9P2M4 693 aa10.23□□□□□ -0.77
UBR4-216ENST00000494503 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
UBR4-216ENST00000494503 COCHO43405 550 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 STX6O43752 255 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 TACC1O75410 805 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 AP1G2O75843 785 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 TOP3BO95985 862 aaKnown RBP10.22□□□□□ -0.77
UBR4-216ENST00000494503 OAS1P00973 400 aaKnown RBP10.22□□□□□ -0.77
UBR4-216ENST00000494503 PROS1P07225 676 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 HOXB2P14652 356 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 HNRNPLP14866 589 aaKnown RBP eCLIP10.22□□□□□ -0.77
UBR4-216ENST00000494503 CASP1P29466 404 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 PTGER3P43115 390 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 CASP4P49662 377 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 SLC5A3P53794 718 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 CDH8P55286 799 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 MESP2Q0VG99 397 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 ORC1Q13415 861 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 CUL4AQ13619 759 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 PSMD6Q15008 389 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 GAB4Q2WGN9 574 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 PREPLQ4J6C6 727 aaPredicted RBP10.22□□□□□ -0.77
UBR4-216ENST00000494503 ZNF667Q5HYK9 610 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 SDE2Q6IQ49 451 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 RHBDF2Q6PJF5 856 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 TRMT11Q7Z4G4 463 aaKnown RBP10.22□□□□□ -0.77
UBR4-216ENST00000494503 FAM35AQ86V20 835 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 HDDC3Q8N4P3 179 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 IQUBQ8NA54 791 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 SCAMP5Q8TAC9 235 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 BHMTQ93088 406 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 ZNF396Q96N95 335 aaPredicted RBP10.22□□□□□ -0.77
UBR4-216ENST00000494503 KCNK16Q96T55 309 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 TTLL2Q9BWV7 592 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 B3GNT5Q9BYG0 378 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 ADAM33Q9BZ11 813 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 ZSCAN16Q9H4T2 348 aaPredicted RBP10.22□□□□□ -0.77
UBR4-216ENST00000494503 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 SLC39A2Q9NP94 309 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 DMAP1Q9NPF5 467 aaPredicted RBP10.22□□□□□ -0.77
UBR4-216ENST00000494503 FSCN3Q9NQT6 498 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.22□□□□□ -0.779e-8■■■■■ 30
UBR4-216ENST00000494503 GMIPQ9P107 970 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 DEC1Q9P2X7 70 aa10.22□□□□□ -0.77
UBR4-216ENST00000494503 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms