RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 MIPP30301 263 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 MATKP42679 507 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 CACNA2D1P54289 1103 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 HDAC4P56524 1084 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 RNASE9P60153 205 aaKnown RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 ADCY2Q08462 1091 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 SMARCB1Q12824 385 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 NNTQ13423 1086 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 CUL1Q13616 776 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TAF5Q15542 800 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 PTPROQ16827 1216 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 CCDC142Q17RM4 750 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TRIM60Q495X7 471 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 MDH1BQ5I0G3 518 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 FAM102AQ5T9C2 384 aaPredicted RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 OTUD1Q5VV17 481 aaPredicted RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 OVOS1Q6IE37 1185 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 OR6B2Q6IFH4 312 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 CCDC70Q6NSX1 233 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 C8orf74Q6P047 294 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TTC27Q6P3X3 843 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 EMBQ6PCB8 327 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 MFSD7Q6UXD7 560 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 SPOCD1Q6ZMY3 1216 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 SYDE1Q6ZW31 735 aaPredicted RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 STRADAQ7RTN6 431 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 FAM35AQ86V20 835 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 METTL23Q86XA0 190 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 IFT20Q8IY31 132 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 GPR65Q8IYL9 337 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 MREGQ8N565 214 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 EMC1Q8N766 993 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 OR10T2Q8NGX3 314 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 DIS3LQ8TF46 1054 aaKnown RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 IRGQQ8WZA9 623 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 RAPGEF5Q92565 580 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 NKD2Q969F2 451 aaPredicted RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 TOP1MTQ969P6 601 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 SMARCD1Q96GM5 515 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 FUBP3Q96I24 572 aaKnown RBP eCLIP7.12□□□□□ -1.27
MSH5-217ENST00000494458 CEP295NLQ96MC4 621 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 PEBP4Q96S96 227 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 SLC9A7Q96T83 725 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 NPY6RQ99463 290 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 ERP44Q9BS26 406 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 AP1M1Q9BXS5 423 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 MRPL9Q9BYD2 267 aaKnown RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 TXLNGYQ9BZA5 131 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 DCLK3Q9C098 648 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 DDX47Q9H0S4 455 aaKnown RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 VIPAS39Q9H9C1 493 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 PRDM16Q9HAZ2 1276 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 ARFGAP3Q9NP61 516 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TMLHEQ9NVH6 421 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TMEM51Q9NW97 253 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 MARCH5Q9NX47 278 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 DNAJB4Q9UDY4 337 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 USP18Q9UMW8 372 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 TIMM13Q9Y5L4 95 aaPredicted RBP7.12□□□□□ -1.27
MSH5-217ENST00000494458 TANC1Q9C0D5 1861 aa7.12□□□□□ -1.27
MSH5-217ENST00000494458 GOLGA6L10A0A0M3HER8 536 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 FAM170AA1A519 330 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 CARNS1A5YM72 827 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 TRIM43BA6NCK2 446 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 F8W810 466 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 GOLGA8SH3BPF8 625 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 CLDN5O00501 218 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 HSF2BPO75031 334 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 EFCAB14O75071 495 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 ERLIN1O75477 346 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 DAB1O75553 588 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 SASH3O75995 380 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 RNF8O76064 485 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 HEXIM1O94992 359 aaKnown RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 IGLV3-25P01717 112 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 CLTBP09497 229 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 FAM200BP0CF97 657 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 ACAT1P24752 427 aaKnown RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 ITGB8P26012 769 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 ADORA2BP29275 332 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 CYP2C18P33260 490 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 NOS2P35228 1153 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 MAGEA11P43364 429 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 SLC11A1P49279 550 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 RGS7P49802 495 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 DNA2P51530 1060 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 SLC8A3P57103 927 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 DAOAP59103 153 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 YWHAZP63104 245 aaKnown RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 YWHAHQ04917 246 aaPredicted RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 ELAVL2Q12926 359 aaKnown RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 PDK2Q15119 407 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 TRADDQ15628 312 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 OASLQ15646 514 aaKnown RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 DPYSL2Q16555 572 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 HADHQ16836 314 aaKnown RBP7.11□□□□□ -1.27
MSH5-217ENST00000494458 LRRC26Q2I0M4 334 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 SLC25A52Q3SY17 297 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 TFDP3Q5H9I0 405 aa7.11□□□□□ -1.27
MSH5-217ENST00000494458 SPDYCQ5MJ68 293 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms