RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 LRRC3Q9BY71 257 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 ULBP1Q9BZM6 244 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 MIS12Q9H081 205 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 AVENQ9NQS1 362 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-223ENST00000494123 IL37Q9NZH6 218 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 TRPM5Q9NZQ8 1165 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 ARHGAP20Q9P2F6 1191 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 THEGQ9P2T0 379 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 FAM50BQ9Y247 325 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 A0A1W2PRU2 124 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 GRXCR2A6NFK2 248 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 E5RJQ4 531 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 FBXO21O94952 628 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 ZBED1O96006 694 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 ABL1P00519 1130 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 EIF4A3P38919 411 aaKnown RBP15.32■□□□□ 0.04
BRCA1-223ENST00000494123 PPP3CCP48454 512 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 GSDMDP57764 484 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 TFF2Q03403 129 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 AAK1Q2M2I8 961 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 PUS10Q3MIT2 529 aaKnown RBP15.32■□□□□ 0.04
BRCA1-223ENST00000494123 ARHGAP15Q53QZ3 475 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 PPP1R2P3Q6NXS1 205 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 GET4Q7L5D6 327 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-223ENST00000494123 OVCA2Q8WZ82 227 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 MRPS31Q92665 395 aaKnown RBP15.32■□□□□ 0.04
BRCA1-223ENST00000494123 CNGB3Q9NQW8 809 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 SCML2Q9UQR0 700 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 USP3Q9Y6I4 520 aa15.32■□□□□ 0.04
BRCA1-223ENST00000494123 DOCK6Q96HP0 2047 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 FAM92AA1XBS5 289 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 TMCO5BA8MYB1 307 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 F11P03951 625 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 UNGP13051 313 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-223ENST00000494123 GJA1P17302 382 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 CCR2P41597 374 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 RPL34P49207 117 aaKnown RBP15.31■□□□□ 0.04
BRCA1-223ENST00000494123 CDK17Q00537 523 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 CENPCQ03188 943 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 SLC5A9Q2M3M2 681 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 PTPN20Q4JDL3 420 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 PTCRAQ6ISU1 281 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-223ENST00000494123 GAREM2Q75VX8 874 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 CCDC186Q7Z3E2 898 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 TMEM110Q86TL2 294 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 SCUBE3Q8IX30 993 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 SLC30A5Q8TAD4 765 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-223ENST00000494123 SUSD6Q92537 303 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 GOLGA1Q92805 767 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 C18orf8Q96DM3 657 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 TCEAL4Q96EI5 215 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 CCDC42Q96M95 316 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 POMKQ9H5K3 350 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 IL21Q9HBE4 155 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 TLR8Q9NR97 1041 aaKnown RBP15.31■□□□□ 0.04
BRCA1-223ENST00000494123 GMIPQ9P107 970 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 CHORDC1Q9UHD1 332 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-223ENST00000494123 ADAMTS1Q9UHI8 967 aa15.31■□□□□ 0.04
BRCA1-223ENST00000494123 SSU72P8A0A1W2PR75 194 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 DDX3XO00571 662 aaKnown RBP eCLIP15.3■□□□□ 0.041e-8■■■□□ 17.6
BRCA1-223ENST00000494123 SART1O43290 800 aaKnown RBP15.3■□□□□ 0.04
BRCA1-223ENST00000494123 AKR1B10O60218 316 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 ERBB2P04626 1255 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 CYP4F8P98187 520 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 PRSS36Q5K4E3 855 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 PM20D1Q6GTS8 502 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 OR6B2Q6IFH4 312 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 MMS22LQ6ZRQ5 1243 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 MON1AQ86VX9 555 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 ARHGAP18Q8N392 663 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 ITFG1Q8TB96 612 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 SHKBP1Q8TBC3 707 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 ING5Q8WYH8 240 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 CHP1Q99653 195 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 C11orf70Q9BRQ4 267 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 SLITRK6Q9H5Y7 841 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 NHEJ1Q9H9Q4 299 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-223ENST00000494123 NAGPAQ9UK23 515 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 NOTCH4Q99466 2003 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 OBSL1O75147 1896 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 DENND4AQ7Z401 1863 aa15.3■□□□□ 0.04
BRCA1-223ENST00000494123 GABBR2O75899 941 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 CALB1P05937 261 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 GZMAP12544 262 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 CEBPBP17676 345 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 GBP2P32456 591 aaPredicted RBP15.29■□□□□ 0.04
BRCA1-223ENST00000494123 PSEN1P49768 467 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 DAOAP59103 153 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 YWHAGP61981 247 aaKnown RBP eCLIP15.29■□□□□ 0.04
BRCA1-223ENST00000494123 MRPS5P82675 430 aaKnown RBP15.29■□□□□ 0.04
BRCA1-223ENST00000494123 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
BRCA1-223ENST00000494123 TEAD2Q15562 447 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 GPR158Q5T848 1215 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 ACAD10Q6JQN1 1059 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 TOGARAM2Q6ZUX3 1019 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 TMEM150AQ86TG1 271 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 ZDHHC17Q8IUH5 632 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 SCML4Q8N228 414 aa15.29■□□□□ 0.04
BRCA1-223ENST00000494123 IRGQQ8WZA9 623 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms