RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ZNF569Q5MCW4 686 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 SDHAF4Q5VUM1 108 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 C11orf63Q6NUN7 778 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 DCUN1D2Q6PH85 259 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 SLC26A9Q7LBE3 791 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 TCEAL8Q8IYN2 117 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 NUP93Q8N1F7 819 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 SCML4Q8N228 414 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 SLC35F6Q8N357 371 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 LRRC57Q8N9N7 239 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 SCAMP5Q8TAC9 235 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 FEZF2Q8TBJ5 459 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 MICAL1Q8TDZ2 1067 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 ARNTL2Q8WYA1 636 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 CEP295NLQ96MC4 621 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 MCEEQ96PE7 176 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 TRIM7Q9C029 511 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 LMAN2LQ9H0V9 348 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 CYP4F11Q9HBI6 524 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 ASNSD1Q9NWL6 643 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 ANAPC7Q9UJX3 599 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 YIPF1Q9Y548 306 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 USP3Q9Y6I4 520 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 EPOPA6NHQ4 379 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 KIF2AO00139 706 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-231ENST00000494043 PRRG1O14668 218 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 TGM5O43548 720 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 HSF2BPO75031 334 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 PALMO75781 387 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 TUBB4AP04350 444 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 USP17L7P0C7H9 530 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 KLRC2P26717 231 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 ELF1P32519 619 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 RFC1P35251 1148 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-231ENST00000494043 ETF1P62495 437 aaKnown RBP11.97□□□□□ -0.49
MCF2L-231ENST00000494043 TAF5Q15542 800 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 EFHC1Q5JVL4 640 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 PM20D1Q6GTS8 502 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 LILRA6Q6PI73 481 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 ARCQ7LC44 396 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 BHLHA9Q7RTU4 235 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 DAAM2Q86T65 1068 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 STKLD1Q8NE28 680 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 JOSD2Q8TAC2 188 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 FNIP1Q8TF40 1166 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 GDPD5Q8WTR4 605 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 IRGQQ8WZA9 623 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.49
MCF2L-231ENST00000494043 BTBD6Q96KE9 485 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 WDR24Q96S15 920 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 IL37Q9NZH6 218 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 LCMT1Q9UIC8 334 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 TMEM59LQ9UK28 342 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 FBXW11Q9UKB1 542 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 INSL5Q9Y5Q6 135 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 MYH10P35580 1976 aa11.97□□□□□ -0.49
MCF2L-231ENST00000494043 LAMA3Q16787 3333 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 A0A1W2PPC1 479 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 C2CD4BA6NLJ0 364 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 SLC38A8A6NNN8 435 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 TMEM110-MUSTN1A8MSY1 372 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 MYO1FO00160 1098 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 DPYSL4O14531 572 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 DAB1O75553 588 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 GRAP2O75791 330 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 PROSCO94903 275 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 RTN3O95197 1032 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-231ENST00000494043 GLUD1P00367 558 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 C1RP00736 705 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 GLI1P08151 1106 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 TNNT1P13805 278 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 ALDH1A3P47895 512 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 CLCN4P51793 760 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 OGDHQ02218 1023 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 ZNF252P-AS1Q0IIN9 211 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 IFRD2Q12894 506 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-231ENST00000494043 MESDQ14696 234 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 TRNP1Q6NT89 227 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 DENND5BQ6ZUT9 1274 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 SLFN11Q7Z7L1 901 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 SYCE1Q8N0S2 351 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 EMC1Q8N766 993 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 GPR152Q8TDT2 470 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 GIPC2Q8TF65 315 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 NDRG1Q92597 394 aaKnown RBP11.96□□□□□ -0.49
MCF2L-231ENST00000494043 FBXO44Q9H4M3 255 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 COMMD8Q9NX08 183 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 IP6K2Q9UHH9 426 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 SCML2Q9UQR0 700 aa11.96□□□□□ -0.49
MCF2L-231ENST00000494043 COL4A4P53420 1690 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-231ENST00000494043 FAM92AA1XBS5 289 aa11.95□□□□□ -0.5
MCF2L-231ENST00000494043 YJEFN3A6XGL0 299 aa11.95□□□□□ -0.5
MCF2L-231ENST00000494043 E7ENQ6 273 aa11.95□□□□□ -0.5
MCF2L-231ENST00000494043 FANCGO15287 622 aa11.95□□□□□ -0.5
MCF2L-231ENST00000494043 CLASP2O75122 1294 aaKnown RBP11.95□□□□□ -0.5
MCF2L-231ENST00000494043 FTCDO95954 541 aa11.95□□□□□ -0.5
MCF2L-231ENST00000494043 LTFP02788 710 aa11.95□□□□□ -0.5
MCF2L-231ENST00000494043 SPATA31D3P0C874 917 aa11.95□□□□□ -0.5
MCF2L-231ENST00000494043 GPD1P21695 349 aa11.95□□□□□ -0.5
MCF2L-231ENST00000494043 YWHAQP27348 245 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms