RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TTC13Q8NBP0 860 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 BBOF1Q8ND07 529 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 CCHCR1Q8TD31 782 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 FAM172AQ8WUF8 416 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 SENP8Q96LD8 212 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 HSFY1Q96LI6 401 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 HNRNPABQ99729 332 aaKnown RBP11.15□□□□□ -0.62
CLCN6-208ENST00000494028 SYT15Q9BQS2 421 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 DNAI2Q9GZS0 605 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
CLCN6-208ENST00000494028 RSAD1Q9HA92 442 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 PCDH18Q9HCL0 1135 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 CRTAC1Q9NQ79 661 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 GPATCH2LQ9NWQ4 482 aa11.15□□□□□ -0.62
CLCN6-208ENST00000494028 APOC4-APOC2K7ER74 178 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 CLDN5O00501 218 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 MDM4O15151 490 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 INPPL1O15357 1258 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 ZNF623O75123 536 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 APOC2P02655 101 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 THP07101 528 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 ZSCAN5DPP0CG00 497 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 NPR3P17342 541 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 CLCNKBP51801 687 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 SNX16P57768 344 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 ATP11AP98196 1134 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 ADIGQ0VDE8 80 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 GRIK3Q13003 919 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 MMRN1Q13201 1228 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 NOMO1Q15155 1222 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 P3H1Q32P28 736 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 PAQR9Q6ZVX9 377 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 TRMT10CQ7L0Y3 403 aaKnown RBP11.14□□□□□ -0.63
CLCN6-208ENST00000494028 ARCQ7LC44 396 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 RNF180Q86T96 592 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 PIGZQ86VD9 579 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 CCDC25Q86WR0 208 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 VSIG1Q86XK7 387 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 TMEM86AQ8N2M4 240 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 LINC01599Q8WXQ3 324 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 TLCD1Q96CP7 247 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 FAF2Q96CS3 445 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 TBCBQ99426 244 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 DDX23Q9BUQ8 820 aaKnown RBP11.14□□□□□ -0.63
CLCN6-208ENST00000494028 TMEM109Q9BVC6 243 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 SEMA4AQ9H3S1 761 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 KRT82Q9NSB4 513 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 NINJ2Q9NZG7 142 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 SHOC2Q9UQ13 582 aa11.14□□□□□ -0.63
CLCN6-208ENST00000494028 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
CLCN6-208ENST00000494028 MOXD2PA6NHM9 499 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ZNF487B1APH4 448 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 MCF2LO15068 1137 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 PRPSAP2O60256 369 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 INHAP05111 366 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 FAM200BP0CF97 657 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 LCP1P13796 627 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ETS1P14921 441 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 PTPN1P18031 435 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ADCY8P40145 1251 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 GDF10P55107 478 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 PLCB3Q01970 1234 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 IFFO1Q0D2I5 559 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 CA9Q16790 459 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ZC3H12AQ5D1E8 599 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 DNAJC21Q5F1R6 531 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 RNASEH2BQ5TBB1 312 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 EMC10Q5UCC4 262 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 CLEC20AQ6ZU45 233 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 GSTA5Q7RTV2 222 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ECHDC2Q86YB7 292 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ZCCHC9Q8N567 271 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 KCTD6Q8NC69 237 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 EPS8L3Q8TE67 593 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 CENPIQ92674 756 aaPredicted RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 PWWP2AQ96N64 755 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 NCAPGQ9BPX3 1015 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 RTP3Q9BQQ7 232 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 PAAF1Q9BRP4 392 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ZNF670Q9BS34 389 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 TMEM121Q9BTD3 319 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 CALN1Q9BXU9 219 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 DUSP16Q9BY84 665 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 FOXP3Q9BZS1 431 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ADAM7Q9H2U9 754 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 DNAJC17Q9NVM6 304 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 DDX43Q9NXZ2 648 aaKnown RBP11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ANAPC5Q9UJX4 755 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 ZNF148Q9UQR1 794 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 SQORQ9Y6N5 450 aa11.13□□□□□ -0.63
CLCN6-208ENST00000494028 A0A0U1RQF3 1178 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 A0A1W2PQ45 241 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 A0A1W2PQY0 241 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 ERICH4A6NGS2 130 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SGK1O00141 431 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 BEST1O76090 585 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 ODC1P11926 461 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 CAPN2P17655 700 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms