RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 C18orf8Q96DM3 657 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
SNX17-208ENST00000493711 ZNF512Q96ME7 567 aaPredicted RBP13.09□□□□□ -0.31
SNX17-208ENST00000493711 KCNK16Q96T55 309 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 SFXN1Q9H9B4 322 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 ST7Q9NRC1 585 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 IL37Q9NZH6 218 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 ADAM22Q9P0K1 906 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 HCFC2Q9Y5Z7 792 aa13.09□□□□□ -0.31
SNX17-208ENST00000493711 ANKRD62A6NC57 917 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 SOWAHDA6NJG2 315 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 SLC38A8A6NNN8 435 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 HHLA1C9JL84 531 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 TNFRSF10BO14763 440 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 GLI1P08151 1106 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 H2AFZP0C0S5 128 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 SPATA31D3P0C874 917 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 EPCAMP16422 314 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 YWHAQP27348 245 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 TKTL1P51854 596 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 SLC5A3P53794 718 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 GSCP56915 257 aaPredicted RBP13.08□□□□□ -0.32
SNX17-208ENST00000493711 GFPT1Q06210 699 aaPredicted RBP13.08□□□□□ -0.32
SNX17-208ENST00000493711 TWF1Q12792 350 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 HYAL1Q12794 435 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 KCNC3Q14003 757 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 PABPC1LQ4VXU2 614 aaKnown RBP13.08□□□□□ -0.32
SNX17-208ENST00000493711 HS1BP3Q53T59 392 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 EFHC1Q5JVL4 640 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 SPATA31D4Q6ZUB0 917 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 H2AFVQ71UI9 128 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 MCOLN2Q8IZK6 566 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 TTC9BQ8N6N2 239 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 OLIG1Q8TAK6 271 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 GOLGA1Q92805 767 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 PSMG2Q969U7 264 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 CALR3Q96L12 384 aaKnown RBP13.08□□□□□ -0.32
SNX17-208ENST00000493711 MYRFLQ96LU7 910 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 SLITRK1Q96PX8 696 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 TTLL2Q9BWV7 592 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 CRISPLD1Q9H336 500 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 IGFLR1Q9H665 355 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 NENFQ9UMX5 172 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 TSC2P49815 1807 aa13.08□□□□□ -0.32
SNX17-208ENST00000493711 KIAA1671Q9BY89 1806 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 FAM92AA1XBS5 289 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 BEST1O76090 585 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 ZBED1O96006 694 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 ATF6P18850 670 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 SSTR3P32745 418 aaPredicted RBP13.07□□□□□ -0.32
SNX17-208ENST00000493711 RGS7P49802 495 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 CACNA2D1P54289 1103 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 CCZ1BP86790 482 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 CCZ1P86791 482 aaPredicted RBP13.07□□□□□ -0.32
SNX17-208ENST00000493711 ADAM15Q13444 863 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 COL19A1Q14993 1142 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 PTPN20Q4JDL3 420 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 PM20D1Q6GTS8 502 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 LLGL2Q6P1M3 1020 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 MON1BQ7L1V2 547 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 CTNNBL1Q8WYA6 563 aaPredicted RBP13.07□□□□□ -0.32
SNX17-208ENST00000493711 CPXM1Q96SM3 734 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 PRKD2Q9BZL6 878 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 MRPL47Q9HD33 250 aaKnown RBP13.07□□□□□ -0.32
SNX17-208ENST00000493711 AVENQ9NQS1 362 aaPredicted RBP13.07□□□□□ -0.32
SNX17-208ENST00000493711 SPTLC3Q9NUV7 552 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 TMEM30AQ9NV96 361 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 ASNSD1Q9NWL6 643 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 CYTH4Q9UIA0 394 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 SCML2Q9UQR0 700 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 USP3Q9Y6I4 520 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 NCANO14594 1321 aa13.07□□□□□ -0.32
SNX17-208ENST00000493711 SOBPA7XYQ1 873 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 TMCO5BA8MYB1 307 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 E5RJQ4 531 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 TNFRSF10AO00220 468 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 TULP2O00295 520 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 ZNF197O14709 1029 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 CCDC175P0C221 793 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 TMEM253P0C7T8 217 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 LCP1P13796 627 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 PTPN2P17706 415 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 MAGEA1P43355 309 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 GPC5P78333 572 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 MRPS5P82675 430 aaKnown RBP13.06□□□□□ -0.32
SNX17-208ENST00000493711 ITIH3Q06033 890 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 ADIGQ0VDE8 80 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 ADGRE1Q14246 886 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 RAD9BQ6WBX8 426 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 BEND5Q7L4P6 421 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 ARCQ7LC44 396 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 DNAJB7Q7Z6W7 309 aaPredicted RBP13.06□□□□□ -0.32
SNX17-208ENST00000493711 MON1AQ86VX9 555 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 C3orf20Q8ND61 904 aa13.06□□□□□ -0.32
SNX17-208ENST00000493711 GIPC2Q8TF65 315 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms