RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 PATE3B3GLJ2 98 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 SGK1O00141 431 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 GIPC1O14908 333 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 COCHO43405 550 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 CUTAO60888 179 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 ALDH1A2O94788 518 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 RTN3O95197 1032 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-210ENST00000493682 CASP1P29466 404 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 KIR2DL1P43626 348 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-210ENST00000493682 DHPSP49366 369 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-210ENST00000493682 HSF5Q4G112 596 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-210ENST00000493682 EMC10Q5UCC4 262 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 DAB2IPQ5VWQ8 1189 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 PDZD8Q8NEN9 1154 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 RLN3Q8WXF3 142 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 FBXO32Q969P5 355 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 SYAP1Q96A49 352 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-210ENST00000493682 ZFRQ96KR1 1074 aaKnown RBP18.46■□□□□ 0.55
COL9A1-210ENST00000493682 ZNF396Q96N95 335 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-210ENST00000493682 SMYD3Q9H7B4 428 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 TBC1D14Q9P2M4 693 aa18.46■□□□□ 0.55
COL9A1-210ENST00000493682 CHORDC1Q9UHD1 332 aaPredicted RBP18.46■□□□□ 0.55
COL9A1-210ENST00000493682 CDX4O14627 284 aaPredicted RBP18.45■□□□□ 0.54
COL9A1-210ENST00000493682 PHACTR2O75167 634 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 YEATS4O95619 227 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 P2RY2P41231 377 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 GRIA2P42262 883 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 TNFRSF4P43489 277 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 CASP4P49662 377 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 CDH8P55286 799 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 KDSRQ06136 332 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 BMT2Q1RMZ1 405 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 LY6G5CQ5SRR4 150 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 C12orf56Q8IXR9 622 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 PHTF2Q8N3S3 785 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 SCAMP5Q8TAC9 235 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 PLEKHO2Q8TD55 490 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 OVCA2Q8WZ82 227 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 PIGKQ92643 395 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 BLZF1Q9H2G9 400 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 VRTNQ9H8Y1 702 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 MAGEF1Q9HAY2 307 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 SLC39A2Q9NP94 309 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 TMEM9BQ9NQ34 198 aa18.45■□□□□ 0.54
COL9A1-210ENST00000493682 CGNQ9P2M7 1197 aaKnown RBP18.45■□□□□ 0.54
COL9A1-210ENST00000493682 THADAQ6YHU6 1953 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 NUP205Q92621 2012 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.44■□□□□ 0.54
COL9A1-210ENST00000493682 TNFRSF10BO14763 440 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 POLR2DO15514 142 aaKnown RBP18.44■□□□□ 0.54
COL9A1-210ENST00000493682 EXOC3O60645 756 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 ADAM23O75077 832 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 IRX4P78413 519 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 EOGTQ5NDL2 527 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 HECTD3Q5T447 861 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 SH3PXD2AQ5TCZ1 1133 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 SNX30Q5VWJ9 437 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 PAQR9Q6ZVX9 377 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 LPCAT2Q7L5N7 544 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 FAM35AQ86V20 835 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 FRMD1Q8N878 549 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 WHAMMQ8TF30 809 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 OTUB2Q96DC9 234 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 MED10Q9BTT4 135 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 POLMQ9NP87 494 aaPredicted RBP18.44■□□□□ 0.54
COL9A1-210ENST00000493682 ZDHHC4Q9NPG8 344 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 IL37Q9NZH6 218 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 CIZ1Q9ULV3 898 aaPredicted RBP18.44■□□□□ 0.54
COL9A1-210ENST00000493682 ZFHX4Q86UP3 3567 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 ATP8B3O60423 1300 aa18.44■□□□□ 0.54
COL9A1-210ENST00000493682 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 K7ELQ4 463 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-210ENST00000493682 MAP3K13O43283 966 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 GAD2Q05329 585 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 BIRC3Q13489 604 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 KNOP1Q1ED39 458 aaKnown RBP18.43■□□□□ 0.54
COL9A1-210ENST00000493682 ZNF699Q32M78 642 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 ETFBKMTQ8IXQ9 262 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 TMEFF1Q8IYR6 380 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 HMGB4Q8WW32 186 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 ELMO3Q96BJ8 720 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 SPACA7Q96KW9 195 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 CCSER2Q9H7U1 834 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 DMAP1Q9NPF5 467 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-210ENST00000493682 BCCIPQ9P287 314 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL9A1-210ENST00000493682 MBD1Q9UIS9 605 aaPredicted RBP18.43■□□□□ 0.54
COL9A1-210ENST00000493682 SH3BP1Q9Y3L3 701 aa18.43■□□□□ 0.54
COL9A1-210ENST00000493682 PVALEFA0A1B0GWK0 134 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 HOXC11O43248 304 aaPredicted RBP18.42■□□□□ 0.54
COL9A1-210ENST00000493682 ZDHHC11BP0C7U3 371 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 PTGER3P43115 390 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 TUBP50607 506 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 SLC5A3P53794 718 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 CLDN10P78369 228 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 ZNF252P-AS1Q0IIN9 211 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 NCOA4Q13772 614 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 MAP7D1Q3KQU3 841 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 ZNF667Q5HYK9 610 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 SCARA5Q6ZMJ2 495 aa18.42■□□□□ 0.54
COL9A1-210ENST00000493682 ARMCX6Q7L4S7 300 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms