RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 CCDC6Q16204 474 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 ZACNQ401N2 412 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 PLK5Q496M5 336 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 PPM1JQ5JR12 505 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 HECTD3Q5T447 861 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 ADGRG2Q8IZP9 1017 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 SPRYD3Q8NCJ5 442 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 TMC2Q8TDI7 906 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 TAF4BQ92750 862 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 COMMD8Q9NX08 183 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 MMP17Q9ULZ9 603 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 FRMD4BQ9Y2L6 1034 aa17.63■□□□□ 0.41
PTPRU-208ENST00000493601 SDK1Q7Z5N4 2213 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 A0A1B0GVL5 298 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 E2F8A0AVK6 867 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 IKBKBO14920 756 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 COCHO43405 550 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 AP1G2O75843 785 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 RHOBTB1O94844 696 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 KIF20AO95235 890 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 TRIM21P19474 475 aaKnown RBP17.62■□□□□ 0.41
PTPRU-208ENST00000493601 PIK3CAP42336 1068 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 DGKEP52429 567 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 DLG4P78352 724 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 C2orf27AQ580R0 203 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 PLA2G2CQ5R387 149 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 SNX30Q5VWJ9 437 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 CEP135Q66GS9 1140 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 ACOT1Q86TX2 421 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 C11orf74Q86VG3 221 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 FUKQ8N0W3 1084 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 SCAMP5Q8TAC9 235 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 CCDC47Q96A33 483 aaKnown RBP17.62■□□□□ 0.41
PTPRU-208ENST00000493601 OTUB2Q96DC9 234 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 SPATA32Q96LK8 384 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 PNKPQ96T60 521 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 SDCBP2Q9H190 292 aa17.62■□□□□ 0.41
PTPRU-208ENST00000493601 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-208ENST00000493601 TNFRSF10BO14763 440 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 SCAMP3O14828 347 aaKnown RBP17.61■□□□□ 0.41
PTPRU-208ENST00000493601 CALUO43852 315 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-208ENST00000493601 APODP05090 189 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 ADH5P11766 374 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 KRT85P78386 507 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 MRPS21P82921 87 aaKnown RBP17.61■□□□□ 0.41
PTPRU-208ENST00000493601 HSF5Q4G112 596 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-208ENST00000493601 USP39Q53GS9 565 aaKnown RBP17.61■□□□□ 0.41
PTPRU-208ENST00000493601 PAQR9Q6ZVX9 377 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 UNC93AQ86WB7 457 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 ELMO3Q96BJ8 720 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 ZFRQ96KR1 1074 aaKnown RBP17.61■□□□□ 0.41
PTPRU-208ENST00000493601 IMPG2Q9BZV3 1241 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 NACA2Q9H009 215 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 DUSP15Q9H1R2 295 aaPredicted RBP17.61■□□□□ 0.41
PTPRU-208ENST00000493601 FBXO44Q9H4M3 255 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 VPS45Q9NRW7 570 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 IL37Q9NZH6 218 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 GMIPQ9P107 970 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 HPSEQ9Y251 543 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 SH3BP1Q9Y3L3 701 aa17.61■□□□□ 0.41
PTPRU-208ENST00000493601 FAM92AA1XBS5 289 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 MAPK13O15264 365 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 KAT7O95251 611 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 ASS1P00966 412 aaKnown RBP17.6■□□□□ 0.41
PTPRU-208ENST00000493601 ADRB1P08588 477 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 ZDHHC11BP0C7U3 371 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 CCDC130P13994 396 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 GBP1P32455 592 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 SYKP43405 635 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 ASPAP45381 313 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 NDST1P52848 882 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 ANO7Q6IWH7 933 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 RHBDF2Q6PJF5 856 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 SV2AQ7L0J3 742 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 RASSF3Q86WH2 238 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 CRYBG2Q8N1P7 616 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 SLC2A14Q8TDB8 520 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 CNOT6LQ96LI5 555 aaKnown RBP17.6■□□□□ 0.41
PTPRU-208ENST00000493601 DUSP9Q99956 384 aaKnown RBP17.6■□□□□ 0.41
PTPRU-208ENST00000493601 CCSER2Q9H7U1 834 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 HMGXB4Q9UGU5 601 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 CHORDC1Q9UHD1 332 aaPredicted RBP17.6■□□□□ 0.41
PTPRU-208ENST00000493601 TRAF3IP3Q9Y228 551 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 MYOFQ9NZM1 2061 aa17.6■□□□□ 0.41
PTPRU-208ENST00000493601 NUP205Q92621 2012 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 DCLK1O15075 740 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 ALDH1A2O94788 518 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 HLA-DRAP01903 254 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 GRIA2P42262 883 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 VAMP7P51809 220 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 KDSRQ06136 332 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 ORC1Q13415 861 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 CRY1Q16526 586 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 NFIL3Q16649 462 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 PREPLQ4J6C6 727 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-208ENST00000493601 LY6G5CQ5SRR4 150 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 BTBD8Q5XKL5 378 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 C12orf40Q86WS4 652 aa17.59■□□□□ 0.41
PTPRU-208ENST00000493601 CCDC33Q8N5R6 958 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms