RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 RAXQ9Y2V3 346 aa15.21■□□□□ 0.03
PRPF40A-211ENST00000493468 STARD13Q9Y3M8 1113 aa15.21■□□□□ 0.03
PRPF40A-211ENST00000493468 SNX9Q9Y5X1 595 aa15.21■□□□□ 0.03
PRPF40A-211ENST00000493468 A0A1W2PQF6 199 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 HCRTO43612 131 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 PPP1R37O75864 691 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 KRT18P05783 430 aaKnown RBP15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 HOXB2P14652 356 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 NTSR1P30989 418 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 WNT7BP56706 349 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 PLEKHG6Q3KR16 790 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 LY6G5CQ5SRR4 150 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 NUDT18Q6ZVK8 323 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 DEFB119Q8N690 84 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 PNPLA1Q8N8W4 532 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 TRIML1Q8N9V2 468 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 TERB1Q8NA31 727 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 HNRNPLLQ8WVV9 542 aaKnown RBP15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 CALML4Q96GE6 196 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 SYT15Q9BQS2 421 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 PCOLCE2Q9UKZ9 415 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 NFE2L3Q9Y4A8 694 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 BPTFQ12830 3046 aa15.2■□□□□ 0.02
PRPF40A-211ENST00000493468 ASXL3Q9C0F0 2248 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 TBC1D3BA6NDS4 549 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 ZBTB24O43167 697 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 TULP3O75386 442 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 ZNF883P0CG24 379 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 GNSP15586 552 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 PLCG1P19174 1290 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 BDNFP23560 247 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 GRIK1P39086 918 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 RBP5P82980 135 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 GRIK2Q13002 908 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 SYCP2LQ5T4T6 812 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 BTBD8Q5XKL5 378 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 TMPRSS7Q7RTY8 843 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 ZNF720Q7Z2F6 126 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 CSGALNACT2Q8N6G5 542 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 KBTBD7Q8WVZ9 684 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 RAD54LQ92698 747 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 FOXJ1Q92949 421 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 LRIG1Q96JA1 1093 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 C8orf48Q96LL4 319 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 FAM213AQ9BRX8 229 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 STRA6Q9BX79 667 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 CRTAC1Q9NQ79 661 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 SMPD4Q9NXE4 827 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 DEC1Q9P2X7 70 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 SIX4Q9UIU6 781 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 HCN2Q9UL51 889 aa15.19■□□□□ 0.02
PRPF40A-211ENST00000493468 KALRNO60229 2985 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 ATP2C2O75185 946 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 DKK1O94907 266 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 LDHAP00338 332 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 NDUFV2P19404 249 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 PSMC1P62191 440 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 DHX8Q14562 1220 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 MCM6Q14566 821 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 WDR45BQ5MNZ6 344 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 C10orf76Q5T2E6 689 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 SLCO6A1Q86UG4 719 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 BAHD1Q8TBE0 780 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 ADAM32Q8TC27 787 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 ZFRQ96KR1 1074 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 ZSCAN31Q96LW9 406 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 RBAKQ9NYW8 714 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 CYP8B1Q9UNU6 501 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 EXOC7Q9UPT5 735 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 SHROOM3Q8TF72 1996 aa15.18■□□□□ 0.02
PRPF40A-211ENST00000493468 GOLGA4Q13439 2230 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 A0A087WV48 116 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 SCAMP3O14828 347 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 KRT19P08727 400 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 MBL2P11226 248 aaPredicted RBP15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 WARSP23381 471 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 UBA7P41226 1012 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 TAF10Q12962 218 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 MYO1EQ12965 1108 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 TDRD10Q5VZ19 366 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 MIB1Q86YT6 1006 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 SCUBE3Q8IX30 993 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 RGL4Q8IZJ4 473 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 PDZD8Q8NEN9 1154 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 OVCA2Q8WZ82 227 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 LARP4BQ92615 738 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 PCED1BQ96HM7 432 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 GABRG3Q99928 467 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 IKZF4Q9H2S9 585 aa15.17■□□□□ 0.02
PRPF40A-211ENST00000493468 A0A1B0GTW7 788 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 F8VP50 259 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 EIF5BO60841 1220 aaKnown RBP15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 NDUFS2O75306 463 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 TMEM191BP0C7N4 346 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 GARTP22102 1010 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 LMO2P25791 158 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms