RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 E5RJQ4 531 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 ARHGAP6O43182 974 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 GLI1P08151 1106 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 LCP1P13796 627 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 HMGA1P17096 107 aaKnown RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 CDC25CP30307 473 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 SCNN1AP37088 669 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 EPHA5P54756 1037 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 MRPS5P82675 430 aaKnown RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 RBM10P98175 930 aaKnown RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 PTPN20Q4JDL3 420 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 ATAT1Q5SQI0 421 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 SYCE2Q6PIF2 218 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 TOGARAM2Q6ZUX3 1019 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 MON1AQ86VX9 555 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 MCOLN2Q8IZK6 566 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 SCAMP5Q8TAC9 235 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 OLIG1Q8TAK6 271 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 GPR152Q8TDT2 470 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 GOLGA1Q92805 767 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 FBXO32Q969P5 355 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 ZNF707Q96C28 371 aaPredicted RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 RIPOR3Q96MK2 946 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 EIF3CQ99613 913 aaKnown RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 ULBP1Q9BZM6 244 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 ASNSD1Q9NWL6 643 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 CLEC1BQ9P126 229 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 CYTH4Q9UIA0 394 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 ZMYM5Q9UJ78 669 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 INTUQ9ULD6 942 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.46
LSM2-214ENST00000493387 COG5Q9UP83 839 aa12.15□□□□□ -0.46
LSM2-214ENST00000493387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.14□□□□□ -0.47
LSM2-214ENST00000493387 ANKRD62A6NC57 917 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 SOWAHDA6NJG2 315 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 TMCO5BA8MYB1 307 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 NDUFA10O95299 355 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 LCA5LO95447 670 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 ERBB2P04626 1255 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 RHOP08100 348 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 H2AFZP0C0S5 128 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 USP17L7P0C7H9 530 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 PFKLP17858 780 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 MTHFRP42898 656 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 GSCP56915 257 aaPredicted RBP12.14□□□□□ -0.47
LSM2-214ENST00000493387 KRT83P78385 493 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 GFPT1Q06210 699 aaPredicted RBP12.14□□□□□ -0.47
LSM2-214ENST00000493387 TAF10Q12962 218 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 CCDC85BQ15834 202 aaPredicted RBP12.14□□□□□ -0.47
LSM2-214ENST00000493387 EFHC1Q5JVL4 640 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 OR6B2Q6IFH4 312 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 TMC5Q6UXY8 1006 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 MMS22LQ6ZRQ5 1243 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 H2AFVQ71UI9 128 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 PDZD4Q76G19 769 aaPredicted RBP12.14□□□□□ -0.47
LSM2-214ENST00000493387 MON1BQ7L1V2 547 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 GPRIN1Q7Z2K8 1008 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 TMEM139Q8IV31 216 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 C12orf76Q8N812 135 aaPredicted RBP12.14□□□□□ -0.47
LSM2-214ENST00000493387 STKLD1Q8NE28 680 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 MSLNLQ96KJ4 702 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 NECTIN4Q96NY8 510 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 CDK5RAP1Q96SZ6 601 aaKnown RBP12.14□□□□□ -0.47
LSM2-214ENST00000493387 CORO1BQ9BR76 489 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 C11orf70Q9BRQ4 267 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 S1PR5Q9H228 398 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 TAS2R14Q9NYV8 317 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 DNMT3BQ9UBC3 853 aaKnown RBP12.14□□□□□ -0.47
LSM2-214ENST00000493387 CD207Q9UJ71 328 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 NENFQ9UMX5 172 aa12.14□□□□□ -0.47
LSM2-214ENST00000493387 CLUHO75153 1309 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 PAPSS1O43252 624 aaPredicted RBP12.13□□□□□ -0.47
LSM2-214ENST00000493387 TBX10O75333 385 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 GABBR2O75899 941 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 F11P03951 625 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 ZDHHC11BP0C7U3 371 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 RALAP11233 206 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 MYL4P12829 197 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 DDX6P26196 483 aaKnown RBP eCLIP12.13□□□□□ -0.473e-8■■■■□ 20
LSM2-214ENST00000493387 LTBRP36941 435 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 MAGEA1P43355 309 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 DAOAP59103 153 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 USP46P62068 366 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 GPC5P78333 572 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 SLC6A3Q01959 620 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 IFRD2Q12894 506 aaPredicted RBP12.13□□□□□ -0.47
LSM2-214ENST00000493387 PTP4A2Q12974 167 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 ARHGAP15Q53QZ3 475 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 BEND5Q7L4P6 421 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 SLC26A9Q7LBE3 791 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 ARCQ7LC44 396 aa12.13□□□□□ -0.47
LSM2-214ENST00000493387 GRASPQ7Z6J2 395 aaPredicted RBP12.13□□□□□ -0.47
LSM2-214ENST00000493387 TADA2BQ86TJ2 420 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms