RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 WDR5BQ86VZ2 330 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 SMYD4Q8IYR2 804 aaPredicted RBP21.79■■□□□ 1.08
CLTA-208ENST00000493185 FMR1NBQ8N0W7 255 aaPredicted RBP21.79■■□□□ 1.08
CLTA-208ENST00000493185 CCDC26Q8TAB7 109 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 RMDN1Q96DB5 314 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 NIF3L1Q9GZT8 377 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 TMEM8AQ9HCN3 771 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 FAM49BQ9NUQ9 324 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 IL37Q9NZH6 218 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 CFAP97Q9P2B7 532 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 CHORDC1Q9UHD1 332 aaPredicted RBP21.79■■□□□ 1.08
CLTA-208ENST00000493185 DCHS1Q96JQ0 3298 aa21.79■■□□□ 1.08
CLTA-208ENST00000493185 MYO16Q9Y6X6 1858 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 FAM200BP0CF97 657 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 EPB41P11171 864 aaKnown RBP21.78■■□□□ 1.08
CLTA-208ENST00000493185 GTF2H1P32780 548 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 TUBP50607 506 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 SRSF5Q13243 272 aaKnown RBP21.78■■□□□ 1.08
CLTA-208ENST00000493185 CEP68Q76N32 757 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.78■■□□□ 1.08
CLTA-208ENST00000493185 C12orf29Q8N999 325 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 SMOQ99835 787 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 NT5C1AQ9BXI3 368 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 FBXO44Q9H4M3 255 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 APOBEC3GQ9HC16 384 aaKnown RBP21.78■■□□□ 1.08
CLTA-208ENST00000493185 USP18Q9UMW8 372 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 CEP250Q9BV73 2442 aa21.78■■□□□ 1.08
CLTA-208ENST00000493185 CCDC163A0A0D9SF12 145 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 CETN3O15182 167 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 COCHO43405 550 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 SMC2O95347 1197 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 ADORA2BP29275 332 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 MAP3K7CLP57077 242 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 SNX30Q5VWJ9 437 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 KRT39Q6A163 491 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 ZMIZ2Q8NF64 920 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 RPLP0P6Q8NHW5 317 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 ACDQ96AP0 544 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 NACA2Q9H009 215 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 CSNK1G1Q9HCP0 422 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 GMIPQ9P107 970 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 TBC1D14Q9P2M4 693 aa21.77■■□□□ 1.08
CLTA-208ENST00000493185 HOOK1Q9UJC3 728 aaKnown RBP21.77■■□□□ 1.08
CLTA-208ENST00000493185 RALGAPA1Q6GYQ0 2036 aa21.77■■□□□ 1.07
CLTA-208ENST00000493185 KIAA1549LQ6ZVL6 1849 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 FAM92AA1XBS5 289 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 STX10O60499 249 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 BEST1O76090 585 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 CYP17A1P05093 508 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 RETP07949 1114 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 LMNB2Q03252 620 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 PUM1Q14671 1186 aaKnown RBP eCLIP21.76■■□□□ 1.075e-8■■□□□ 12.9
CLTA-208ENST00000493185 ZNF658Q5TYW1 1059 aaPredicted RBP21.76■■□□□ 1.07
CLTA-208ENST00000493185 CAMKK1Q8N5S9 505 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 CYFIP2Q96F07 1278 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 EEF2KMTQ96G04 330 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 GSDMAQ96QA5 445 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 HNRNPABQ99729 332 aaKnown RBP21.76■■□□□ 1.07
CLTA-208ENST00000493185 TSG101Q99816 390 aa21.76■■□□□ 1.07
CLTA-208ENST00000493185 SPAG17Q6Q759 2223 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 MYOFQ9NZM1 2061 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 E2F8A0AVK6 867 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 SCAMP3O14828 347 aaKnown RBP21.75■■□□□ 1.07
CLTA-208ENST00000493185 LRP3O75074 770 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 ADH1CP00326 375 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 ZDHHC11BP0C7U3 371 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 CD58P19256 250 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 SDHBP21912 280 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 HOXC13P31276 330 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 OPRD1P41143 372 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 PRCPP42785 496 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 PXNP49023 591 aaPredicted RBP21.75■■□□□ 1.07
CLTA-208ENST00000493185 MXI1P50539 228 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 DHCR24Q15392 516 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 SYT13Q7L8C5 426 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 ADGRG2Q8IZP9 1017 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 EZH1Q92800 747 aaPredicted RBP21.75■■□□□ 1.07
CLTA-208ENST00000493185 TWNKQ96RR1 684 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 GTPBP4Q9BZE4 634 aaKnown RBP21.75■■□□□ 1.07
CLTA-208ENST00000493185 CCSER2Q9H7U1 834 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 TLR8Q9NR97 1041 aaKnown RBP21.75■■□□□ 1.07
CLTA-208ENST00000493185 SH3BP1Q9Y3L3 701 aa21.75■■□□□ 1.07
CLTA-208ENST00000493185 PRR5-ARHGAP8B1AHC4 643 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 CILPO75339 1184 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 ARHGAP8P85298 464 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 SPEM2Q0P670 501 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 FBXL13Q8NEE6 735 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 GAB3Q8WWW8 586 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 SMARCE1Q969G3 411 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 OTUB2Q96DC9 234 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 FAXDC2Q96IV6 333 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 HHIPQ96QV1 700 aa21.74■■□□□ 1.07
CLTA-208ENST00000493185 TLR5O60602 858 aa21.73■■□□□ 1.07
CLTA-208ENST00000493185 RPP40O75818 363 aaKnown RBP21.73■■□□□ 1.07
CLTA-208ENST00000493185 CCDC192P0DO97 292 aa21.73■■□□□ 1.07
CLTA-208ENST00000493185 TGM1P22735 817 aa21.73■■□□□ 1.07
CLTA-208ENST00000493185 MCCD1P59942 119 aaPredicted RBP21.73■■□□□ 1.07
CLTA-208ENST00000493185 DMC1Q14565 340 aa21.73■■□□□ 1.07
CLTA-208ENST00000493185 RSPO4Q2I0M5 234 aaPredicted RBP21.73■■□□□ 1.07
CLTA-208ENST00000493185 GAB4Q2WGN9 574 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms