RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 OPTNQ96CV9 577 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 PAWRQ96IZ0 340 aaKnown RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 GBA2Q9HCG7 927 aaPredicted RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 CYP4F12Q9HCS2 524 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 STARD7Q9NQZ5 370 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 CISHQ9NSE2 258 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 SETD4Q9NVD3 440 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 AP4E1Q9UPM8 1137 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 SDR42E2A6NKP2 422 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 DAB1O75553 588 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 SETD3Q86TU7 594 aaPredicted RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 NSL1Q96IY1 281 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 SEMA6BQ9H3T3 888 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 EIF3LQ9Y262 564 aaKnown RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 LRRIQ3A6PVS8 624 aaPredicted RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 HNRNPRO43390 633 aaKnown RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 RANBP1P43487 201 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 TIGD7Q6NT04 549 aaPredicted RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 CIPCQ9C0C6 399 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 KRT8P05787 483 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 S100A5P33763 92 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 NME5P56597 212 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 RPL10AP62906 217 aaKnown RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 LY6KQ17RY6 165 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 PCSK9Q8NBP7 692 aaKnown RBP14.09□□□□□ -0.15
TRIM11-204ENST00000493030 GMCL1Q96IK5 515 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 SERPINB12Q96P63 405 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 TMEM121Q9BTD3 319 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 USP18Q9UMW8 372 aa14.09□□□□□ -0.15
TRIM11-204ENST00000493030 CBX4O00257 560 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 HOXA2O43364 376 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 SLC9A5Q14940 896 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 CACHD1Q5VU97 1274 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 ELOA2Q8IYF1 753 aaPredicted RBP14.08□□□□□ -0.15
TRIM11-204ENST00000493030 ATP8B4Q8TF62 1192 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 TMEM176AQ96HP8 235 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 DNAJC7Q99615 494 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 RAD18Q9NS91 495 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 ATP11BQ9Y2G3 1177 aa14.08□□□□□ -0.15
TRIM11-204ENST00000493030 SPTLC1O15269 473 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 POMCP01189 267 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 APOA4P06727 396 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 SERPINB5P36952 375 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 COPAP53621 1224 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 RHOAP61586 193 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 CYP24A1Q07973 514 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 LAMTOR4Q0VGL1 99 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 CHMP1BQ7LBR1 199 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 OTOAQ7RTW8 1153 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 ZNF720Q7Z2F6 126 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 ARRDC4Q8NCT1 418 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 GMCL1P1Q8NEA9 526 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 TNIP2Q8NFZ5 429 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 FICDQ9BVA6 458 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 UBP1Q9NZI7 540 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 H3BRB1 525 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 CYTH3O43739 400 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 GLRA3O75311 464 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
TRIM11-204ENST00000493030 JCHAINP01591 159 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 RHOCP08134 193 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 C10orf53Q8N6V4 93 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 SYTL5Q8TDW5 730 aaPredicted RBP14.08□□□□□ -0.16
TRIM11-204ENST00000493030 TUT1Q9H6E5 874 aaKnown RBP14.08□□□□□ -0.16
TRIM11-204ENST00000493030 KCNA3P22001 575 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 TOB1P50616 345 aaPredicted RBP14.08□□□□□ -0.16
TRIM11-204ENST00000493030 CAMK2GQ13555 558 aaPredicted RBP14.08□□□□□ -0.16
TRIM11-204ENST00000493030 MIER2Q8N344 545 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 SLC20A1Q8WUM9 679 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 SMAD5Q99717 465 aaKnown RBP14.08□□□□□ -0.16
TRIM11-204ENST00000493030 PDCD2LQ9BRP1 358 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 USE1Q9NZ43 259 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 ZNF711Q9Y462 761 aa14.08□□□□□ -0.16
TRIM11-204ENST00000493030 XPO1O14980 1071 aaKnown RBP14.07□□□□□ -0.16
TRIM11-204ENST00000493030 DEAF1O75398 565 aaPredicted RBP14.07□□□□□ -0.16
TRIM11-204ENST00000493030 GSNP06396 782 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 TKTL1P51854 596 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 RUNX1T1Q06455 604 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 CXCL9Q07325 125 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 Q4G0T1 1027 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 ADGRA1Q86SQ6 560 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 WDR49Q8IV35 697 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 CLPBQ9H078 707 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 SYTL2Q9HCH5 934 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 SCN3BQ9NY72 215 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 SNTG2Q9NY99 539 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 CAPN6Q9Y6Q1 641 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 IGF2BP3O00425 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRIM11-204ENST00000493030 AKAP3O75969 853 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 TFE3P19532 575 aaPredicted RBP14.07□□□□□ -0.16
TRIM11-204ENST00000493030 TARSP26639 723 aaKnown RBP14.07□□□□□ -0.16
TRIM11-204ENST00000493030 GPC1P35052 558 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 LHX1P48742 406 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 ZNF284Q2VY69 593 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 C11orf63Q6NUN7 778 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 RXFP2Q8WXD0 754 aa14.07□□□□□ -0.16
TRIM11-204ENST00000493030 ZNF333Q96JL9 665 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms