RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 RAB20Q9NX57 234 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 MAN1B1Q9UKM7 699 aa19.09■□□□□ 0.65
PTPRU-207ENST00000492954 K7ESF4 209 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 STX10O60499 249 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 PAPSS2O95340 614 aaPredicted RBP19.08■□□□□ 0.64
PTPRU-207ENST00000492954 FAM200BP0CF97 657 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 MBL2P11226 248 aaPredicted RBP19.08■□□□□ 0.64
PTPRU-207ENST00000492954 HOXC13P31276 330 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 NRLP54845 237 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 FKBP3Q00688 224 aaKnown RBP19.08■□□□□ 0.64
PTPRU-207ENST00000492954 LRRC63Q05C16 580 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 CBWD6Q4V339 395 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 CBWD3Q5JTY5 395 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 CBWD5Q5RIA9 395 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 TCERG1LQ5VWI1 586 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 CYFIP2Q96F07 1278 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 HNRNPABQ99729 332 aaKnown RBP19.08■□□□□ 0.64
PTPRU-207ENST00000492954 P2RY13Q9BPV8 354 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 HINFPQ9BQA5 517 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 GTPBP4Q9BZE4 634 aaKnown RBP19.08■□□□□ 0.64
PTPRU-207ENST00000492954 COMMD8Q9NX08 183 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 CFAP97Q9P2B7 532 aa19.08■□□□□ 0.64
PTPRU-207ENST00000492954 SMG5Q9UPR3 1016 aaKnown RBP19.08■□□□□ 0.64
PTPRU-207ENST00000492954 SPTBN4Q9H254 2564 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 FAM92AA1XBS5 289 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 CHURC1-FNTBB4DL54 471 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 PSMA7O14818 248 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 COCHO43405 550 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 ZDHHC11BP0C7U3 371 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 CD44P16070 742 aaKnown RBP19.07■□□□□ 0.64
PTPRU-207ENST00000492954 TRIM21P19474 475 aaKnown RBP19.07■□□□□ 0.64
PTPRU-207ENST00000492954 FNTBP49356 437 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 PGFP49763 221 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 NR1H3Q13133 447 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 ZNF394Q53GI3 561 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 HECTD3Q5T447 861 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 SNX30Q5VWJ9 437 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 CLEC20AQ6ZU45 233 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 GPRIN1Q7Z2K8 1008 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 FILIP1Q7Z7B0 1213 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 ELOA2Q8IYF1 753 aaPredicted RBP19.07■□□□□ 0.64
PTPRU-207ENST00000492954 DCLK2Q8N568 766 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 RUBCNQ92622 972 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 JAKMIP2Q96AA8 810 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 ZFRQ96KR1 1074 aaKnown RBP19.07■□□□□ 0.64
PTPRU-207ENST00000492954 ARID3AQ99856 593 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 EPC1Q9H2F5 836 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 CCSER2Q9H7U1 834 aa19.07■□□□□ 0.64
PTPRU-207ENST00000492954 HELZP42694 1942 aaKnown RBP19.06■□□□□ 0.64
PTPRU-207ENST00000492954 HHLA1C9JL84 531 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 RNF40O75150 1001 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 NFATC1O95644 943 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 DRD1P21728 446 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 STIM1Q13586 685 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 EZH1Q92800 747 aaPredicted RBP19.06■□□□□ 0.64
PTPRU-207ENST00000492954 CD101Q93033 1021 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 TATDN2Q93075 761 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 FBXO44Q9H4M3 255 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 CISHQ9NSE2 258 aa19.06■□□□□ 0.64
PTPRU-207ENST00000492954 ARMCX3Q9UH62 379 aaPredicted RBP19.06■□□□□ 0.64
PTPRU-207ENST00000492954 CIZ1Q9ULV3 898 aaPredicted RBP19.06■□□□□ 0.64
PTPRU-207ENST00000492954 CYP17A1P05093 508 aa19.05■□□□□ 0.64
PTPRU-207ENST00000492954 BMP6P22004 513 aa19.05■□□□□ 0.64
PTPRU-207ENST00000492954 TUBP50607 506 aa19.05■□□□□ 0.64
PTPRU-207ENST00000492954 GAB4Q2WGN9 574 aa19.05■□□□□ 0.64
PTPRU-207ENST00000492954 PPP1R26Q5T8A7 1209 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-207ENST00000492954 HEATR6Q6AI08 1181 aaKnown RBP19.05■□□□□ 0.64
PTPRU-207ENST00000492954 DDX42Q86XP3 938 aaKnown RBP eCLIP19.05■□□□□ 0.64
PTPRU-207ENST00000492954 EXOC4Q96A65 974 aa19.05■□□□□ 0.64
PTPRU-207ENST00000492954 DHTKD1Q96HY7 919 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-207ENST00000492954 FAXDC2Q96IV6 333 aa19.05■□□□□ 0.64
PTPRU-207ENST00000492954 POLR3BQ9NW08 1133 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-207ENST00000492954 ACO1P21399 889 aaKnown RBP19.04■□□□□ 0.64
PTPRU-207ENST00000492954 OPRD1P41143 372 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 SRSF5Q13243 272 aaKnown RBP19.04■□□□□ 0.64
PTPRU-207ENST00000492954 KLHL10Q6JEL2 608 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 KIAA2013Q8IYS2 634 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 ADGRG2Q8IZP9 1017 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 KIAA1958Q8N8K9 716 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 SLC4A11Q8NBS3 891 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 SLC35C1Q96A29 364 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 HEXIM2Q96MH2 286 aaKnown RBP19.04■□□□□ 0.64
PTPRU-207ENST00000492954 DUSP9Q99956 384 aaKnown RBP19.04■□□□□ 0.64
PTPRU-207ENST00000492954 DNAI2Q9GZS0 605 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 TLR8Q9NR97 1041 aaKnown RBP19.04■□□□□ 0.64
PTPRU-207ENST00000492954 NCDNQ9UBB6 729 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 SCML2Q9UQR0 700 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 COQ4Q9Y3A0 265 aa19.04■□□□□ 0.64
PTPRU-207ENST00000492954 DMXL1Q9Y485 3027 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 PPP1R3GB7ZBB8 358 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 BIN1O00499 593 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 SLC9A3R1O14745 358 aaPredicted RBP19.03■□□□□ 0.64
PTPRU-207ENST00000492954 CYP26A1O43174 497 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 TLR5O60602 858 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 RAD23BP54727 409 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 DHCR24Q15392 516 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 LPAL2Q16609 132 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 FBXO43Q4G163 708 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 LONP2Q86WA8 852 aa19.03■□□□□ 0.64
PTPRU-207ENST00000492954 NACA2Q9H009 215 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms