RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 ABL1P00519 1130 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PAEPP09466 180 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 VDRP11473 427 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 ARSAP15289 507 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TCF3P15923 654 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PFKLP17858 780 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TARSP26639 723 aaKnown RBP7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 MTIF2P46199 727 aaKnown RBP7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 MLLT6P55198 1093 aaPredicted RBP7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PDE4CQ08493 712 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 CETN1Q12798 172 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 USP4Q13107 963 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 MAN2A1Q16706 1144 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TPD52L1Q16890 204 aaPredicted RBP7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 GOLGA7BQ2TAP0 167 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 VWA3BQ502W6 1294 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 ARHGAP29Q52LW3 1261 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 SGO2Q562F6 1265 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TCP11X2Q5H9J9 407 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 RAB41Q5JT25 222 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 CCDC183Q5T5S1 534 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 CDKAL1Q5VV42 579 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TRIM65Q6PJ69 517 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TXNDC11Q6PKC3 985 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TPRG1Q6ZUI0 275 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 BHLHA9Q7RTU4 235 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 SCD5Q86SK9 330 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PIGZQ86VD9 579 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 YAF2Q8IY57 180 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 CCDC105Q8IYK2 499 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PDZD8Q8NEN9 1154 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PJA1Q8NG27 643 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 UBA3Q8TBC4 463 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 SH3RF2Q8TEC5 729 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 WBP2Q969T9 261 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 JAKMIP2Q96AA8 810 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 SHDQ96IW2 340 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 SLITRK1Q96PX8 696 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TUBGCP2Q9BSJ2 902 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 HSD3B7Q9H2F3 369 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 NDST4Q9H3R1 872 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 CCSER2Q9H7U1 834 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 KIF9Q9HAQ2 790 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PNPLA8Q9NP80 782 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 LTB4R2Q9NPC1 389 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 UBE2TQ9NPD8 197 aaPredicted RBP7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 ACP6Q9NPH0 428 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 TSPAN16Q9UKR8 245 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 KIAA1257Q9ULG3 409 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 SIT1Q9Y3P8 196 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 NFE2L3Q9Y4A8 694 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PCDHB4Q9Y5E5 795 aa7.59□□□□□ -1.19
PDLIM1-204ENST00000492511 PTPRDP23468 1912 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 COL4A2P08572 1712 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 CACNA1HO95180 2353 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 A0A1W2PQH9 124 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 GTPBP10A4D1E9 387 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 FAM170BA6NMN3 283 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 KCNJ18B7U540 433 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 SPECC1L-ADORA2AF8WAN1 911 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 GALR2O43603 387 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 GREM1O60565 184 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 CKMP06732 381 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 CD19P15391 556 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 BRD2P25440 801 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 TUBP50607 506 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 YWHAEP62258 255 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 PLCB2Q00722 1185 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 RUNX3Q13761 415 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 KCNJ12Q14500 433 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 MTF1Q14872 753 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 NCAPHQ15003 741 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 CNGA2Q16280 664 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 EXOC3L4Q17RC7 722 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 EML3Q32P44 896 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 HECTD3Q5T447 861 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 NAIF1Q69YI7 327 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 SASS6Q6UVJ0 657 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 LCLAT1Q6UWP7 414 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 ZNF852Q6ZMS4 543 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 GBP6Q6ZN66 633 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 CCDC186Q7Z3E2 898 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 MAML2Q8IZL2 1156 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 DTWD2Q8NBA8 298 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 RBBP8NLQ8NC74 664 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 SLC35F5Q8WV83 523 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 OSCP1Q8WVF1 389 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 FAM3CQ92520 227 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 NDRG1Q92597 394 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 CLDN23Q96B33 292 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 FUCA2Q9BTY2 467 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 OSBPL6Q9BZF3 934 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 FBXO44Q9H4M3 255 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 EBF3Q9H4W6 596 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 FBRSL1Q9HCM7 1045 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 ANO10Q9NW15 660 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 FANCLQ9NW38 375 aa7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 THG1LQ9NWX6 298 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-204ENST00000492511 SMPD4Q9NXE4 827 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms