RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 K7EQS6 105 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 TRAK2O60296 914 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 NOL4O94818 638 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 FAM13AO94988 1023 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 ACTN2P35609 894 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 CCDC173Q0VFZ6 552 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 USP4Q13107 963 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 DHX8Q14562 1220 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 DDR2Q16832 855 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 BROXQ5VW32 411 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 ADALQ6DHV7 355 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 DHRS13Q6UX07 377 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 CLEC18BQ6UXF7 455 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 CRELD2Q6UXH1 353 aaPredicted RBP12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 TTC30AQ86WT1 665 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 ERICH1Q86X53 443 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 CLEC18CQ8NCF0 446 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 MYRFLQ96LU7 910 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 LINC00597Q9H2U6 94 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 PARVGQ9HBI0 331 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 BLOC1S4Q9NUP1 217 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 HSPBP1Q9NZL4 362 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 WNT6Q9Y6F9 365 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 STYXL1Q9Y6J8 313 aa12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 MYO18AQ92614 2054 aaKnown RBP12.55□□□□□ -0.4
CACNA1C-228ENST00000492150 BSNQ9UPA5 3926 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 SPTBN1Q01082 2364 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 CDK4P11802 303 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 CYP2F1P24903 491 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 IFNAR2P48551 515 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 TSPY1Q01534 308 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 MYO1EQ12965 1108 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 NFE2Q16621 373 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 CCDC142Q17RM4 750 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 KRTAP21-3Q3LHN1 58 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 TBC1D25Q3MII6 688 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 SV2CQ496J9 727 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 ZC2HC1CQ53FD0 456 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 RILPL1Q5EBL4 403 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 ARHGAP40Q5TG30 622 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 ARL6IP4Q66PJ3 421 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 IL27RAQ6UWB1 636 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 PDCL2Q8N4E4 241 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 LEO1Q8WVC0 666 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 ATP2A3Q93084 1043 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 TRMT2BQ96GJ1 504 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 ZNF419Q96HQ0 510 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 PSMG3-AS1Q96PY0 264 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 PKMYT1Q99640 499 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 IKZF4Q9H2S9 585 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 GCNT4Q9P109 453 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 UXTQ9UBK9 157 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 AGO2Q9UKV8 859 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 L1RE1Q9UN81 338 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 PCDHGA1Q9Y5H4 931 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 TCHHQ07283 1943 aa12.54□□□□□ -0.4
CACNA1C-228ENST00000492150 GOLGA8CPA6NN73 597 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 SLC26A4O43511 780 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 CILPO75339 1184 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 JUPP14923 745 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 OPRD1P41143 372 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 WNT7BP56706 349 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 RPL10AP62906 217 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 POU5F1Q01860 360 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 MCM6Q14566 821 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 GAB4Q2WGN9 574 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 SCARA3Q6AZY7 606 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 CCDC33Q8N5R6 958 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 ARL14EPQ8N8R7 260 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 TRIML1Q8N9V2 468 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 ZNF248Q8NDW4 579 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 SH3RF2Q8TEC5 729 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 HMGB4Q8WW32 186 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 HSPA12BQ96MM6 686 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 LGMNQ99538 433 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 ACBD6Q9BR61 282 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 GAREM1Q9H706 876 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 ABCB6Q9NP58 842 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 SEPT3Q9UH03 358 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 BOD1L1Q8NFC6 3051 aa12.53□□□□□ -0.4
CACNA1C-228ENST00000492150 ITPR2Q14571 2701 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 TRAV19A0A0A6YYK7 116 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 C2orf78A6NCI8 922 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 CKMP06732 381 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 TCF3P15923 654 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 ACAT1P24752 427 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 MATKP42679 507 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 SEC13P55735 322 aa12.52□□□□□ -0.41
CACNA1C-228ENST00000492150 NFATC3Q12968 1075 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms