RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 PSMC2P35998 433 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 PIK3CAP42336 1068 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 CXCL12P48061 93 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 GALK1P51570 392 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 CCR3P51677 355 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 SLC7A9P82251 487 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 FKBP3Q00688 224 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 INCA1Q0VD86 236 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 LRRC32Q14392 662 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 EDRF1Q3B7T1 1238 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 ANO6Q4KMQ2 910 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 CT47A1Q5JQC4 288 aaPredicted RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 CC2D1AQ6P1N0 951 aaPredicted RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 NUP93Q8N1F7 819 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 TTC16Q8NEE8 873 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 SLC2A14Q8TDB8 520 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 ATRIPQ8WXE1 791 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 EPC1Q9H2F5 836 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 KRT82Q9NSB4 513 aa13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 POLR3BQ9NW08 1133 aaPredicted RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 DUS2Q9NX74 493 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-206ENST00000491668 ATG2BQ96BY7 2078 aa13.46□□□□□ -0.26
SEC61A1-206ENST00000491668 FAM92AA1XBS5 289 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 ANTXRLA6NF34 631 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 LEFTY2O00292 366 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 SCAMP3O14828 347 aaKnown RBP13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 EGFP01133 1207 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 ZDHHC11BP0C7U3 371 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 PFKLP17858 780 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 YWHAQP27348 245 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 IFRD2Q12894 506 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 UNC93AQ86WB7 457 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 SYNPOQ8N3V7 929 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 SMARCD1Q96GM5 515 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 TNIP3Q96KP6 325 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 FAM126AQ9BYI3 521 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 MMRN2Q9H8L6 949 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 TMEM8AQ9HCN3 771 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 CSNK1G1Q9HCP0 422 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 DMAP1Q9NPF5 467 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 FAM49BQ9NUQ9 324 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 SMPD4Q9NXE4 827 aa13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 CHORDC1Q9UHD1 332 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-206ENST00000491668 CHURC1-FNTBB4DL54 471 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 HHLA1C9JL84 531 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 AP1G2O75843 785 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 CLSTN1O94985 981 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 ABL1P00519 1130 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 EPB41P11171 864 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 KRT13P13646 458 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 P4HA1P13674 534 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 PPP3CCP48454 512 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 FNTBP49356 437 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 SLC5A3P53794 718 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 SRSF5Q13243 272 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 SNX30Q5VWJ9 437 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 TTI2Q6NXR4 508 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 C11orf57Q6ZUT1 292 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 GPRIN1Q7Z2K8 1008 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 CREBRFQ8IUR6 639 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 RUBCNQ92622 972 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 WBP2Q969T9 261 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 ARID3AQ99856 593 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 MED10Q9BTT4 135 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 NIF3L1Q9GZT8 377 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 TSPY26PQ9H489 355 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 EHD2Q9NZN4 543 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 GMIPQ9P107 970 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 CPQQ9Y646 472 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 MYO16Q9Y6X6 1858 aa13.44□□□□□ -0.26
SEC61A1-206ENST00000491668 BECN2A8MW95 431 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 COCHO43405 550 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 HRO43593 1189 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CILPO75339 1184 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 RTN3O95197 1032 aaPredicted RBP13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CD58P19256 250 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 TGM1P22735 817 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 GTF2H1P32780 548 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 OPRD1P41143 372 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 IFNAR2P48551 515 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 ZNF165P49910 485 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 MAP3K7CLP57077 242 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 MESP2Q0VG99 397 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CCDC40Q4G0X9 1142 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CBWD6Q4V339 395 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CBWD3Q5JTY5 395 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CBWD5Q5RIA9 395 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 KRT39Q6A163 491 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CLEC20AQ6ZU45 233 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 FILIP1Q7Z7B0 1213 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CPA6Q8N4T0 437 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 OVCA2Q8WZ82 227 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 ATP2A3Q93084 1043 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 FBXO32Q969P5 355 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
SEC61A1-206ENST00000491668 SLITRK1Q96PX8 696 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms