RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 LMNB2Q03252 620 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 INCA1Q0VD86 236 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 DCAF17Q5H9S7 520 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 Q6ZS52 159 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 FUKQ8N0W3 1084 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 TAS1R2Q8TE23 839 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 HEXIM2Q96MH2 286 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 HNRNPABQ99729 332 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 PNPLA8Q9NP80 782 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 FAM49BQ9NUQ9 324 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 RAB20Q9NX57 234 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 ARMCX3Q9UH62 379 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 PCDHA5Q9Y5H7 936 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 BICDL2A1A5D9 508 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 ZBTB24O43167 697 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 OAS1P00973 400 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 RETP07949 1114 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 CCDC130P13994 396 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 ASPAP45381 313 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 GAD2Q05329 585 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 PPP3CAQ08209 521 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 SNX30Q5VWJ9 437 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 SPOPLQ6IQ16 392 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 FSTL4Q6MZW2 842 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 FOXR2Q6PJQ5 311 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 ERMP1Q7Z2K6 904 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 FILIP1Q7Z7B0 1213 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 WDR5BQ86VZ2 330 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 DHTKD1Q96HY7 919 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 LINC00597Q9H2U6 94 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 CSNK1G1Q9HCP0 422 aa17.51■□□□□ 0.39
PDLIM2-217ENST00000491330 LRP3O75074 770 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 ALDH1A2O94788 518 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 OLFM2O95897 454 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 EGFP01133 1207 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 APODP05090 189 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 RALAP11233 206 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 PRCPP42785 496 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 MCCD1P59942 119 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 UBE2HP62256 183 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 PUM1Q14671 1186 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 SMYD4Q8IYR2 804 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 ADGRG2Q8IZP9 1017 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 ARHGAP18Q8N392 663 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 SCAMP5Q8TAC9 235 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 PNKPQ96T60 521 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 RNF38Q9H0F5 515 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 SDCBP2Q9H190 292 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 HESX1Q9UBX0 185 aa17.5■□□□□ 0.39
PDLIM2-217ENST00000491330 F5P12259 2224 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 COCHO43405 550 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 TLR5O60602 858 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 CILPO75339 1184 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 FGFR1OPO95684 399 aaKnown RBP17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 ACO1P21399 889 aaKnown RBP17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 TBXAS1P24557 533 aaPredicted RBP17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 EIF2DP41214 584 aaKnown RBP17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 CACNA2D1P54289 1103 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 GAS6Q14393 721 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 DHCR24Q15392 516 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 CCDC40Q4G0X9 1142 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 ZCWPW2Q504Y3 356 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 SYT13Q7L8C5 426 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 CACNA2D4Q7Z3S7 1137 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 C11orf74Q86VG3 221 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 C12orf29Q8N999 325 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 RPLP0P6Q8NHW5 317 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 CHFRQ96EP1 664 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 TMEM176AQ96HP8 235 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 CEP63Q96MT8 703 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 IL37Q9NZH6 218 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 GMIPQ9P107 970 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 SCML2Q9UQR0 700 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 NME7Q9Y5B8 376 aa17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 NUP210Q8TEM1 1887 aaPredicted RBP17.49■□□□□ 0.39
PDLIM2-217ENST00000491330 OTOL1A6NHN0 477 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 K7ESF4 209 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 TNFRSF10BO14763 440 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 RPP40O75818 363 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 APBB3O95704 486 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 ADH5P11766 374 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 TDGF1P13385 188 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 MRPS21P82921 87 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 ORC1Q13415 861 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 ELF2Q15723 593 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 HSF5Q4G112 596 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 ZNF394Q53GI3 561 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 C1orf220Q5T0J3 134 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 PAQR9Q6ZVX9 377 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 TRMT11Q7Z4G4 463 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 DCLK2Q8N568 766 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 JAKMIP2Q96AA8 810 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 XPO6Q96QU8 1125 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 SMOQ99835 787 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 DUSP16Q9BY84 665 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 CDV3Q9UKY7 258 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 TICRRQ7Z2Z1 1910 aa17.48■□□□□ 0.39
PDLIM2-217ENST00000491330 FAM92AA1XBS5 289 aa17.47■□□□□ 0.39
PDLIM2-217ENST00000491330 AXIN1O15169 862 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms