RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 CHORDC1Q9UHD1 332 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-216ENST00000490796 SH3BP1Q9Y3L3 701 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 PCDHGA5Q9Y5G8 931 aa20.92■□□□□ 0.94
SREBF1-216ENST00000490796 OLFM2O95897 454 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 APODP05090 189 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 ZNF806P0C7X5 589 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 OPRD1P41143 372 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 PIK3CAP42336 1068 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 SYKP43405 635 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 SLC5A3P53794 718 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 SF3A2Q15428 464 aaKnown RBP20.91■□□□□ 0.94
SREBF1-216ENST00000490796 USP39Q53GS9 565 aaKnown RBP20.91■□□□□ 0.94
SREBF1-216ENST00000490796 TTC30AQ86WT1 665 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 TMC2Q8TDI7 906 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 USP33Q8TEY7 942 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 DDX1Q92499 740 aaKnown RBP20.91■□□□□ 0.94
SREBF1-216ENST00000490796 TAF4BQ92750 862 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 EZH1Q92800 747 aaPredicted RBP20.91■□□□□ 0.94
SREBF1-216ENST00000490796 PNKPQ96T60 521 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 KCTD10Q9H3F6 313 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 KRT82Q9NSB4 513 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 COMMD8Q9NX08 183 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 EBF1Q9UH73 591 aa20.91■□□□□ 0.94
SREBF1-216ENST00000490796 HELZP42694 1942 aaKnown RBP20.9■□□□□ 0.94
SREBF1-216ENST00000490796 E2F8A0AVK6 867 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-216ENST00000490796 ALDH1A2O94788 518 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 VNN1O95497 513 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 ADH5P11766 374 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 DLG4P78352 724 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 PLK5Q496M5 336 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 PPM1JQ5JR12 505 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 BTBD8Q5XKL5 378 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 C11orf74Q86VG3 221 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 CCDC33Q8N5R6 958 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 SCAMP5Q8TAC9 235 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 ELMO3Q96BJ8 720 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 ZC3H10Q96K80 434 aaKnown RBP20.9■□□□□ 0.94
SREBF1-216ENST00000490796 DNAI2Q9GZS0 605 aa20.9■□□□□ 0.94
SREBF1-216ENST00000490796 K7EQS6 105 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 IKBKBO14920 756 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 COCHO43405 550 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 CCDC130P13994 396 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 MPLP40238 635 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 NDST1P52848 882 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 MRPS21P82921 87 aaKnown RBP20.89■□□□□ 0.93
SREBF1-216ENST00000490796 ZACNQ401N2 412 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 SV2AQ7L0J3 742 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 UNC93AQ86WB7 457 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 TMEM174Q8WUU8 243 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 SDCBP2Q9H190 292 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 FBXO44Q9H4M3 255 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 ARHGEF4Q9NR80 690 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 VPS45Q9NRW7 570 aa20.89■□□□□ 0.93
SREBF1-216ENST00000490796 DCLK1O15075 740 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 KRT13P13646 458 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 EIF2DP41214 584 aaKnown RBP20.88■□□□□ 0.93
SREBF1-216ENST00000490796 VAMP7P51809 220 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 CREB5Q02930 508 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 GAD2Q05329 585 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 ORC1Q13415 861 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 PREPLQ4J6C6 727 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-216ENST00000490796 ANO7Q6IWH7 933 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 RHBDF2Q6PJF5 856 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 PAQR9Q6ZVX9 377 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 FUKQ8N0W3 1084 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 CCDC150Q8NCX0 1101 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 SLC2A14Q8TDB8 520 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 OTUB2Q96DC9 234 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 TPSD1Q9BZJ3 242 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 CCSER2Q9H7U1 834 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.88■□□□□ 0.931e-7■■■■■ 44.7
SREBF1-216ENST00000490796 FAM49BQ9NUQ9 324 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 GMIPQ9P107 970 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 CIZ1Q9ULV3 898 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-216ENST00000490796 MMP17Q9ULZ9 603 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 ATP6V1DQ9Y5K8 247 aa20.88■□□□□ 0.93
SREBF1-216ENST00000490796 ACACBO00763 2458 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 TNFRSF10BO14763 440 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 KAT7O95251 611 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 HLA-DRAP01903 254 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 FAM200BP0CF97 657 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 IRF1P10914 325 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 NR2F2P24468 414 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 RPL13P26373 211 aaKnown RBP20.87■□□□□ 0.93
SREBF1-216ENST00000490796 TIE1P35590 1138 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 GRIA2P42262 883 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 SLC6A11P48066 632 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 TUBP50607 506 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 MAP3K7CLP57077 242 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 LY6G5CQ5SRR4 150 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 NUDT18Q6ZVK8 323 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 CCDC34Q96HJ3 373 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 DUSP15Q9H1R2 295 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-216ENST00000490796 TLR8Q9NR97 1041 aaKnown RBP20.87■□□□□ 0.93
SREBF1-216ENST00000490796 HPSEQ9Y251 543 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 INVSQ9Y283 1065 aa20.87■□□□□ 0.93
SREBF1-216ENST00000490796 KLF8O95600 359 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-216ENST00000490796 ASS1P00966 412 aaKnown RBP20.86■□□□□ 0.93
SREBF1-216ENST00000490796 ADORA2BP29275 332 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms