RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ORC3Q9UBD5 711 aaPredicted RBP14.67□□□□□ -0.06
EXOSC3-207ENST00000490516 GTF3C4Q9UKN8 822 aa14.67□□□□□ -0.06
EXOSC3-207ENST00000490516 NFE2L3Q9Y4A8 694 aa14.67□□□□□ -0.06
EXOSC3-207ENST00000490516 DOPEY2Q9Y3R5 2298 aa14.67□□□□□ -0.06
EXOSC3-207ENST00000490516 MYH10P35580 1976 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 KPNA7A9QM74 516 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 KCNK3O14649 394 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 TRIM66O15016 1216 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 CTDNEP1O95476 244 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 HNF1BP35680 557 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 IL12RB1P42701 662 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 GRK6P43250 576 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 CSNK1EP49674 416 aaKnown RBP14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 USP46P62068 366 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 GAD2Q05329 585 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 TARDBPQ13148 414 aaKnown RBP eCLIP14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 RTP5Q14D33 572 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 BMP2KLQ5H9B9 411 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 RINT1Q6NUQ1 792 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 C1orf186Q6ZWK4 172 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 SKAP1Q86WV1 359 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 FGF11Q92914 225 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 WBP1Q96G27 269 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 PKMYT1Q99640 499 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 CCSER1Q9C0I3 900 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 C17orf75Q9HAS0 396 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 ZSWIM6Q9HCJ5 1215 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 DEC1Q9P2X7 70 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 EIF2B4Q9UI10 523 aaKnown RBP14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 SNX11Q9Y5W9 270 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 SLCO1B1Q9Y6L6 691 aa14.66□□□□□ -0.06
EXOSC3-207ENST00000490516 OGTO15294 1046 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 HCRTO43612 131 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 OR52Z1P0C646 297 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 CSRP3P50461 194 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 FOSBP53539 338 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 RHDQ02161 417 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 KCNH2Q12809 1159 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 SF3A1Q15459 793 aaKnown RBP14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 KYAT1Q16773 422 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 KIF19Q2TAC6 998 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 INTS6LQ5JSJ4 861 aaKnown RBP14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 COLEC12Q5KU26 742 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 BTBD8Q5XKL5 378 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 SDE2Q6IQ49 451 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 USP49Q70CQ1 688 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 CD302Q8IX05 232 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 DIS3L2Q8IYB7 885 aaKnown RBP14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 PDCL2Q8N4E4 241 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 KIAA1958Q8N8K9 716 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 C1orf216Q8TAB5 229 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 SPIRE2Q8WWL2 714 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 TMEM176AQ96HP8 235 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 GABRG3Q99928 467 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 NRSN2Q9GZP1 204 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 DDX43Q9NXZ2 648 aaKnown RBP14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 DPP3Q9NY33 737 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 TRPM5Q9NZQ8 1165 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 FTSJ1Q9UET6 329 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 STARD13Q9Y3M8 1113 aa14.65□□□□□ -0.06
EXOSC3-207ENST00000490516 METTL12A8MUP2 240 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 KCNJ18B7U540 433 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 WASH3PC4AMC7 463 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 BRINP1O60477 761 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 OLFM2O95897 454 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 ABL1P00519 1130 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 PLS3P13797 630 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 FDPSP14324 419 aaKnown RBP14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 PFKLP17858 780 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 LIG4P49917 911 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 SMTNP53814 917 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 ZNF174Q15697 407 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 ARHGAP40Q5TG30 622 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 SPATA2LQ8IUW3 424 aaPredicted RBP14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 CADM4Q8NFZ8 388 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 ACBD6Q9BR61 282 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 CPNE5Q9HCH3 593 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 CPSF3Q9UKF6 684 aaKnown RBP14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 DERAQ9Y315 318 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 CYP46A1Q9Y6A2 500 aa14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 UBR5O95071 2799 aaPredicted RBP14.64□□□□□ -0.07
EXOSC3-207ENST00000490516 NUMA1Q14980 2115 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 ZNF840PA6NDX5 716 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 CBX4O00257 560 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 HOXC11O43248 304 aaPredicted RBP14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 CDC45O75419 566 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 IL9RQ01113 521 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 ANO4Q32M45 955 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 SV2CQ496J9 727 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 CFAP221Q4G0U5 840 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 NUDT18Q6ZVK8 323 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 ERICH1Q86X53 443 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 TMEM25Q86YD3 366 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 ENGASEQ8NFI3 743 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 WASF1Q92558 559 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 NAF1Q96HR8 494 aaKnown RBP14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 ZFRQ96KR1 1074 aaKnown RBP14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 MSTO1Q9BUK6 570 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 TRIM4Q9C037 500 aa14.63□□□□□ -0.07
EXOSC3-207ENST00000490516 USP36Q9P275 1121 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms